Streptococcus intermedius B196: SIR_0549
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Entry
SIR_0549 CDS
T02830
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
sib
Streptococcus intermedius B196
Brite
KEGG Orthology (KO) [BR:
sib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sib03016
]
SIR_0549 (truB)
Enzymes [BR:
sib01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
SIR_0549 (truB)
Transfer RNA biogenesis [BR:
sib03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
SIR_0549 (truB)
Prokaryotic type
SIR_0549 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB_C
Motif
Other DBs
NCBI-ProteinID:
AGU75921
UniProt:
T1ZDZ8
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All DBs
Position
552563..553441
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AA seq
292 aa
AA seq
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MNGIINLRKEAGMTSHDAVFKLRKILKTKKIGHGGTLDPDVVGVLPIAVGKATRLVEFMQ
EEGKVYEGEITLGCSTTTEDTSGDILERTPVTELLEEALIDEAMESMTGEIRQIPPMYSA
VKVNGRKLYEYARAGQEVERPERQVTIYSFERTSPISYEDEKARFRFRVKCSKGTYVRTL
SVDLGVKLGLASHMSQLTRISSAGMSLEDALTLDEIAERVAEEDFSFLQPLELGIGDLVK
IDLTKEQAEDVRFGRFIDVNSNETQVAGFFQGKLLAILEKRDEEYRPRKVFL
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atgaacggaattatcaacttaagaaaagaagcgggcatgacctcgcatgatgcggtattt
aagctgcgcaagattttaaaaaccaagaaaatcggtcatgggggtaccttggatccagat
gtggtcggggtgcttccgattgctgtgggcaaggcgacgcgcttggtcgagttcatgcag
gaggaaggcaaggtctacgagggggagattaccctgggctgctcaacaacgacagaggat
accagcggagacatcctagagcggacgccagtgacagagcttttagaagaagcccttatc
gatgaagcgatggagtccatgactggtgagattcgccagattccgcccatgtactcagca
gtcaaggtcaatggccgcaagctttatgagtatgcaagagcgggtcaagaagtggagcgg
ccagagcggcaggtgaccatctatagttttgagcgcaccagtccgatttcctatgaagat
gaaaaagcccgctttcgttttcgagtgaagtgcagcaaggggacctatgtccggaccctg
tctgttgatttaggagtcaagcttggcttggccagtcacatgtctcagctgacacggatt
tcctcagcaggtatgagtttagaagatgccttgaccttggatgaaatagcagagcgagta
gcagaggaggatttttccttcctccaaccactcgaattgggtataggggatttggttaag
atagaccttacaaaagaacaggcagaggatgtgcgatttggtcgatttattgatgtgaat
tccaatgaaactcaagtagctggatttttccaggggaaattgcttgctattctagaaaag
cgtgacgaagaatatagacctagaaaagtgtttctttaa
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