KEGG   Streptococcus intermedius B196: SIR_0682
Entry
SIR_0682          CDS       T02830                                 
Symbol
hsdR
Name
(GenBank) type I site-specific deoxyribonuclease, HsdR family
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
sib  Streptococcus intermedius B196
Brite
KEGG Orthology (KO) [BR:sib00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:sib02048]
    SIR_0682 (hsdR)
Enzymes [BR:sib01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     SIR_0682 (hsdR)
Prokaryotic defense system [BR:sib02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   SIR_0682 (hsdR)
SSDB
Motif
Pfam: SWI2_SNF2 T1R_D3-like ResIII HSDR_N EcoR124_C DEAD
Other DBs
NCBI-ProteinID: AGU76053
UniProt: T1ZDQ2
LinkDB
Position
687964..691173
AA seq 1069 aa
MKEAQFEKELIEYLSTGTIVQDTSDSTVHDRLADYVTKTKLWTYEPSIKTTEALWENFKK
ILEQHNYQRLQRPLSPTEFAQVKAIISDLHTPYMAGQFLYGLNGISEIGIDSDDGQHIFL
TVFDQRQIGAGDTIYQIVSQIERPAVIAGKQDRRFDTTLLINGLPIIQIEEKKDTHDVNE
ALNQMHQYIEENQYRDIFSTVQILVAITPNNVKYMANTTADKFNKDFAFNWQRKSDNSIV
RNWKEFADSMLSIPMAHQMATNYMILDGTKNKQMLKVMRPYQVYATQEVIEGLKKVDFEM
GTNKVGYIWHTTGSGKTITSFKTAWLASRMPKIDKVVFVVDRIALTNQTTENYQAYDPDG
AGEKDDGKIFDTKNTTDLSRKLKSKENGIVITSIQKLNTLINRKSFKSPEKNIVFVVDEA
HRSTGGSSFSDIQKAFKRAAWVGYTGTPMFDDMGKEVRTEDVFGRLLHAYTIREAIADRN
VLGFKVDFETTISEEEMKENYLPAFYRERYPKWSEEQIQEKIANLSQEDMDDAVEPSFYD
ENEAHVKEVVKDIFANWRNRSSDGKYNALLTTHVGGNKASTPMAMMYFREFQRVNQELLE
AEKESQTLKVAVTFSLNASNNDSMVATNKGLHEAMQVYNDTFGTKFGLDNVSGYTEDVTS
RLNKTAADGQFLDLVIVIDQLLTGFDAPELNTLYVDRTLKGAGLIQAYSRTNRVSDMQEK
PWGRVVNYRWPAQNEKLMNKALAIYANKDSAKLSDKELHEQNKEDGITAPEFRELFNKVK
QIVQTLSEMTDSFTQLPPSEKKKEKMLELLQNYNAGIAKLKQYDYNPDSDVVEGFDYDNP
DALIEALGMTSTQEVMLTTVLTNELKTHLSKAKKIPFYQIELRMTHIKDVKVDYDYLTEL
VEALLNQVHEGRIEEAEVTQEKINQFANGLDDRSYAQQIVDAADMIIKGHFPPAGSEFHY
PAKLNEDDSKSIIQEASTISLDRTLLDFRLKWGITDVITSSQMRQLFSRHRLGQQDLDDT
GQIQDIVTQASSNYKVMASDDAVQTLSKIKYRNSLRQAIYQLADDLTER
NT seq 3210 nt   +upstreamnt  +downstreamnt
atgaaagaagcgcaatttgagaaagaacttattgaatatttgtcgacaggtacgatcgtt
caagatacaagtgattcgacagttcatgatcgtctagcagattatgtgacgaaaaccaaa
ttatggacttatgaaccgtccattaaaacgacggaagcgctctgggagaatttcaagaag
atactggagcagcacaattatcaaagattgcaacgtccacttagcccgactgagtttgct
caagtaaaagcgattatctcagatctccacacgccatatatggcaggtcagtttttgtat
gggctgaatggcatttcagagattggaattgactcagatgacggacagcatatatttttg
actgtctttgaccaaagacagattggggcaggtgacaccatttatcagatagtcagtcag
attgagcggcctgcagtcatcgctggaaagcaagatcgtcgttttgatacaacgcttctg
attaacggcttgccaattatccagatcgaagaaaaaaaggatactcatgatgtcaatgaa
gcactcaaccaaatgcaccagtatattgaagaaaatcaatatcgcgatattttttcaacc
gtacaaattttagttgctattacaccaaataacgtcaagtacatggcaaacacaactgca
gataagtttaacaaggattttgcttttaactggcagcgtaaaagtgacaatagcattgtc
cgaaattggaaagagtttgcagactccatgctctctatcccgatggcgcaccagatggcg
accaattatatgattttggatggaaccaaaaacaaacagatgctaaaagtcatgcgcccc
tatcaggtctatgccactcaggaagtcatcgaaggactaaaaaaagttgattttgaaatg
ggtaccaataaagtgggctatatctggcatacgacggggtctgggaagaccattaccagc
tttaaaacagcatggctagctagccgtatgcctaagattgataaggttgtctttgtcgta
gaccggattgctcttaccaatcagacaaccgaaaattatcaagcctatgatccagatgga
gcgggtgaaaaagacgatggtaaaatctttgatacaaaaaatacaactgatttaagccga
aagttaaaatcaaaagagaatggtatcgttatcacatcgattcaaaaactgaacacactc
atcaatcgtaagtcctttaaatcacctgagaaaaatatagtttttgtagtagatgaagca
caccggtcaaccggcggcagctctttctcagatattcaaaaagcctttaagcgagcagcc
tgggttggctacacggggacaccgatgtttgacgatatgggaaaagaagtgcggacagag
gacgtttttggcagactgctgcatgcctacaccatccgtgaagcgattgcggatcgcaat
gtattaggatttaaagtcgactttgagaccaccattagcgaagaagaaatgaaggaaaat
tacctaccagctttctatcgggaacgctatccaaagtggtccgaggagcagattcaggaa
aaaatcgccaatctttcgcaagaagatatggatgatgccgtggaacccagcttttatgat
gaaaatgaagcccatgtgaaagaagttgtaaaggatatttttgctaactggcgtaatcgt
tccagtgacggtaaatacaatgctctcttgactactcatgtcggtggcaacaaggccagc
acgccaatggcgatgatgtatttcagagagtttcagcgggttaatcaagagttgctcgaa
gctgaaaaagagagtcaaactttgaaagtggcagttacatttagccttaatgcttctaac
aatgatagcatggtagctaccaataaagggctacatgaagctatgcaggtttataatgat
acttttggcactaaatttggtttagacaacgtctcaggctacacagaagatgtcacttca
cgattgaataaaacggccgcagatggacagtttctagatcttgttatcgtgattgatcag
cttctgacgggatttgatgctccagagctcaatacactatatgtcgatcgcacattgaaa
ggcgctgggctaatacaggcatattcacgaacgaatcgtgtctcagacatgcaggaaaaa
ccatgggggcgcgtggtgaattatcgctggcctgctcagaatgaaaagctgatgaataag
gcattggccatctacgccaacaaggattctgccaaactttcagacaaagaactccacgag
caaaataaggaagatggcattactgcgccagagtttagagaactgtttaacaaagtgaag
caaatcgttcaaactctgtcagagatgacggattctttcacccagcttccaccttctgaa
aagaaaaaggaaaaaatgttggagttgcttcagaattataatgctggcattgctaaattg
aagcaatatgattataatccagatagtgatgtagtagaaggtttcgactatgataacccg
gatgctctcattgaagctctgggcatgacaagcacgcaggaagtaatgctgacaactgtt
ttgacaaatgagctcaagacgcacctttctaaagcaaagaaaattcctttctatcagatt
gagctgaggatgacgcatatcaaggatgtgaaggttgactacgactatctgacagaattg
gtagaagccctcttgaatcaggtacacgaaggtcggatagaagaggcagaagtaacacag
gaaaaaatcaatcagtttgccaatggtttggacgatcgaagctatgctcaacagattgtg
gatgcagcagatatgattatcaaagggcacttccctccggctggcagtgagttccactat
cccgctaaattgaatgaagatgatagcaagagtattattcaggaggcgagtactattagt
ctcgaccggacgctgcttgattttcgtttgaagtggggaattacggacgttatcaccagt
agtcaaatgcgtcagttgtttagccgtcaccgcttggggcagcaagatctggatgataca
gggcagatacaagatattgtgacccaagccagcagcaattataaagtcatggctagtgat
gacgctgttcaaactctctcaaaaatcaaatatcggaatagcctgcgtcaagccatttac
cagctggcagatgatttgacagagagatga

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