Streptococcus intermedius B196: SIR_1155
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Entry
SIR_1155 CDS
T02830
Name
(GenBank) putative ABC-type bacteriocin transporter
KO
K20344
ATP-binding cassette, subfamily C, bacteriocin exporter
Organism
sib
Streptococcus intermedius B196
Pathway
sib02010
ABC transporters
sib02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
sib00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
SIR_1155
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
SIR_1155
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sib01002
]
SIR_1155
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sib02000
]
SIR_1155
Peptidases and inhibitors [BR:
sib01002
]
Cysteine peptidases
Family C39
SIR_1155
Transporters [BR:
sib02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
SIR_1155
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
Peptidase_C39
ABC_tran
ABC_ATPase
SMC_N
AAA_22
nSTAND3
Zeta_toxin
AAA_24
ATP-synt_ab
NB-ARC
AAA_33
AAA_5
AAA_29
Motif
Other DBs
NCBI-ProteinID:
AGU76516
UniProt:
T1ZFN9
LinkDB
All DBs
Position
complement(1212231..1214381)
Genome browser
AA seq
716 aa
AA seq
DB search
MNVKKTFVPQIDARDCGVAALASIAKYYGSDYSLAHLRELAKTSKEGTTALGIVQAAQEI
GFETRPIQGDMSLFDMEAIPYPFIVHVQKKGKLPHYYVIYKNTKKGLLVGDPDPSVKITK
ISKETFATEWTGVAIFLAPEPSYKPHKDKKNGLISLIPLIFKQKMLVTYIVLASLLVTLI
NIVGSYYLQGILDEYIPNQMRSTLGIVSIGLIITYILQQMMSFSRDYLLIVLSQRLTIDV
ILSYIRHIFELPMSFFATRRTGEIISRFTDANSIIDALASTILSLFLDLSILIIVGGVLL
LQNTNLFFLTLLAIPIYTVIIFAFIKPFEKMNHDVMQSNSMVNSAIIEDINGIETIKSLT
SEEARYQKIDSEFVNYLDKSFTLSKYSIFQTTLKQGFQLILNVLILWLGAHLVISEKISI
GQLITFTALLSYFTNSLESIINLQTKLQSAKVANKRLNEVYLVESEFKTKQTLTEKGFLA
GDITFHNVSYKYGFGRDTLSDINLTIKTGDKVSLVGISGSGKTTLAKMMVHFYEPYKGQI
RLNGNDLKMIDKKTLRQYINYLPQQAYIFSGSILENLTLGTNQIFSQKEIIRACEIAEIR
SDIEQMPMGYQTELSDGAGLSGGQRQRIALARALLTKSPILILDEATSGLDVLTEKKVID
NLMGLKDKTIIFVAHRLSISKRTNQVIVLDKGQIIETGSHAELMERQGFYHHLFNK
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
gtgaatgttaagaaaacatttgttcctcaaatagatgcaagagattgcggtgtcgctgcg
cttgcttccattgcaaaatactatggttcagactactctcttgcacatctgagagaactt
gctaagacaagtaaagaagggacaacggctcttggaattgttcaagcagcgcaagaaata
ggttttgagacacgaccgattcaaggggatatgtctttgtttgatatggaagctattccc
tatccttttatcgttcatgttcagaaaaaaggtaaactcccacattattatgttatctat
aaaaatacgaaaaaaggtctgctagttggagatcctgatccaagtgtaaaaataaccaag
atctcaaaagaaacatttgcaacagaatggactggtgttgctatttttttagcaccagaa
cctagctataaaccacataaggataagaaaaatggtttgataagcttaattcctcttatt
tttaaacagaaaatgctggtcacctatattgttttagctagtctgcttgtgacactcatc
aatattgttggatcttactacctacaaggaattttagacgaatacattccaaatcaaatg
agatcaactcttggaatagtgtctattggtctgattattacttatattttgcagcaaatg
atgagtttttccagagattacttattgattgtacttagtcagcggctgaccattgatgtg
attttatcatatattcgacacatttttgaattaccaatgtctttttttgctacgagacgc
actggagagattatttctcgttttacagatgctaattccattattgatgctctcgcttct
acaatactttcactctttcttgacctttctattttgataatagtaggaggggtattatta
ttacagaataccaaccttttcttcctcactctgcttgctattcctatctatacggtgatt
atttttgcttttataaagccttttgaaaaaatgaatcatgacgtcatgcaaagcaattcc
atggtaaattctgctattatcgaagatattaatggcattgaaaccattaaatctttaaca
agcgaagaagctcgttaccaaaagatagacagcgaatttgtaaattatttagataaatct
tttacgcttagtaaatattctatttttcaaacaacccttaaacaaggatttcaattaatt
ttaaatgtgcttattttatggctcggtgcgcatttagttatatctgagaaaatctcaatt
gggcagctcatcacatttacggctctactttcttattttacaaattctcttgaaagtatt
attaatctgcaaactaagctgcagtcggctaaggttgctaacaagcggttgaatgaagtt
tatttagtagagtctgaatttaaaactaagcaaacacttacagagaaaggtttcttggct
ggtgatattacgttccataatgtctcctataaatacggcttcggacgagatacgttatcg
gatattaacttaacaataaaaacaggagataaggtgagcttagtcggcatcagtggttcg
ggaaagacaacacttgccaaaatgatggttcatttttatgagccttataaagggcaaatc
cgtctcaatggaaatgaccttaaaatgattgataagaagacacttcgtcaatatatcaat
tatttaccacaacaagcctatatttttagtggttccatcttagaaaatcttacattaggg
acgaatcaaatattttctcaaaaagagattattcgcgcttgtgaaattgcagaaattcgt
tcggatattgaacaaatgcctatgggatatcaaacagaattgtccgatggagctggtcta
tcaggtggacaaaggcaacgaattgctctagcacgcgccctcttaacaaagtcaccaatt
cttattcttgacgaagcaacgagcggattggatgttctaactgagaaaaaggtcattgac
aatctgatgggtttaaaagacaaaacgattatttttgttgctcatcgtctcagcatttca
aagcggacaaatcaggttattgttcttgataaagggcagattattgaaactggatcccac
gctgaattgatggaaagacaaggcttttatcatcatttatttaataaataa
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