Streptococcus intermedius B196: SIR_1515
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Entry
SIR_1515 CDS
T02830
Symbol
rpoE
Name
(GenBank) DNA-directed RNA polymerase subunit delta
KO
K03048
DNA-directed RNA polymerase subunit delta
Organism
sib
Streptococcus intermedius B196
Pathway
sib03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
sib00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
SIR_1515 (rpoE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sib03021
]
SIR_1515 (rpoE)
03400 DNA repair and recombination proteins [BR:
sib03400
]
SIR_1515 (rpoE)
Transcription machinery [BR:
sib03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
SIR_1515 (rpoE)
DNA repair and recombination proteins [BR:
sib03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
SIR_1515 (rpoE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HARE-HTH
DUF7197
Glypican
Methyltransf_1N
Motif
Other DBs
NCBI-ProteinID:
AGU76866
UniProt:
T1ZGL3
LinkDB
All DBs
Position
complement(1592413..1593000)
Genome browser
AA seq
195 aa
AA seq
DB search
MELEVFAGQEKSELSMIEVARAILETRGRHHEMYFNDLVNEIQNYLEKSNSDIREALPLF
YTELNVDGSFISLGDNKWGLRSWYAIDEVDEEIITLEEDNEEAPKKRKKKRVNAFMDGDE
NAIDYNDDDPEDEDSYEADPALNYDEDNPDDEKSEVEAYDAEINEIAPDDLDEEVELNEE
DEEYSDDEVDSEDEE
NT seq
588 nt
NT seq
+upstream
nt +downstream
nt
ttggaattagaagtatttgctggacaagaaaaaagtgagctttctatgattgaagtggca
cgtgctatcttagagacacgtggtcgtcatcatgaaatgtattttaacgatcttgtcaat
gaaattcaaaattaccttgaaaaatcaaatagtgatattcgtgaagcattgccactcttt
tatacagaattgaatgtggacggtagttttatttctctaggggataacaaatggggcttg
cgttcctggtatgccattgacgaagtagatgaagaaatcattacacttgaagaagataat
gaagaagctcctaagaaacggaagaagaaacgtgtgaatgcctttatggacggagatgaa
aacgccattgactataatgacgatgatccagaagacgaagattcatacgaagcggatcct
gctctcaattatgacgaggacaatccagacgatgagaaaagcgaagtggaagcttacgat
gctgaaattaacgaaattgcacctgatgatttagatgaagaagtcgaactcaatgaagaa
gatgaggagtactcagatgatgaggtagattcagaggatgaagaatag
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