Streptococcus intermedius B196: SIR_1687
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Entry
SIR_1687 CDS
T02830
Symbol
radA
Name
(GenBank) DNA repair protein
KO
K04485
DNA repair protein RadA/Sms
Organism
sib
Streptococcus intermedius B196
Brite
KEGG Orthology (KO) [BR:
sib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sib03400
]
SIR_1687 (radA)
DNA repair and recombination proteins [BR:
sib03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
SIR_1687 (radA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_25
ATPase
Zn_ribbon_LapB
ChlI
DnaB_C
Lon_C
DUF7125
AAA_22
AAA_16
GvpD_P-loop
AAA_14
AAA
nSTAND_NTPase5
nSTAND3
ABC_tran
Rad51
NTPase_1
SLFN-g3_helicase
NACHT
AAA_24
AAA_5
KdpD
HypA
ATPase_2
MCM
divDNAB
DUF7129
ATP-synt_ab
AAA_18
NPHP3_N
KTI12
zf-RING_10
ABC_ATPase
Motif
Other DBs
NCBI-ProteinID:
AGU77034
UniProt:
T1ZFN0
LinkDB
All DBs
Position
complement(1789360..1790775)
Genome browser
AA seq
471 aa
AA seq
DB search
MADCWNSNERRITIAKKKTTFVCQECGYNSPKYLGRCPNCSSWSSFVEEIEVAEVKNARV
SLTGEKTRPVKLNQVTSSQATRVKTNMEEFNRVLGGGVVPGSLVLIGGDPGIGKSTLLLQ
VSTQLANKGTVFYVSGEESAEQIKLRSERLGDIDNEFYLYAETNMQSIRAEIEKIQPDFL
IIDSIQTVMSPEISSVQGSVSQVREVTAELMQLAKTNNIATFIVGHVTKEGTLAGPRMLE
HMVDTVLYFEGERQHTFRILRAVKNRFGSTNEIGIFEMRSGGLVEVLNPSQVFLEERLDG
ATGSAIVVTMEGTRPILAEVQALVTPTVFGNAKRTTTGLDFNRVSLIMAVLEKRCGLLLQ
NQDAYLKSAGGVRLDEPAIDLAVAVAIASSYKEKPTNPQECYIGEIGLTGEIRRVNRIEQ
RLNEASKLGFTKIFVPKNSLSGLTIPQGIQVVGVTTVGEVLKKVFDEVNKN
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atggcagattgctggaatagtaacgaaaggagaattaccatagctaagaaaaaaacaact
tttgtctgtcaagagtgcggctataattcgcccaagtatctgggacgttgtcctaattgc
tcgtcttggtcttcttttgttgaagagattgaagttgctgaggttaaaaatgctcgcgtt
tcactgacaggtgagaagacacggccagtcaagttaaatcaggtcacctccagccaagcc
actagagtcaagaccaatatggaagaattcaaccgtgttttgggcggtggtgttgtacca
ggcagtctggttcttatcggcggcgatcccggtatcgggaaatcgaccctacttttgcaa
gtttcaacacaattagccaataaaggaactgttttttatgtttctggtgaagaatcagca
gagcagatcaagttgcgtagcgagcgtcttggtgatattgacaatgagttttatctctat
gctgaaactaatatgcaaagtattcgtgctgagattgaaaaaatccagcctgatttttta
attattgattctattcaaacagtgatgagtcctgaaatttccagtgttcaaggttctgtt
tctcaggtgcgtgaagtgacagcagaattaatgcaattagctaaaaccaataatattgcg
acttttattgttggacatgtgactaaagaaggaaccttagctggaccgcgaatgttagaa
cacatggtggacactgtgctctactttgaaggcgagcggcagcatacttttcgtatctta
cgagccgttaaaaatcgctttggttctactaatgagattggtatttttgaaatgaggtcg
ggtggtttggttgaggttttgaatcccagccaagtttttttagaagagcgtctagatgga
gcaacaggctcagctattgttgttaccatggaaggaacacggcctattttagcggaggta
caagccctagtaacaccgactgtctttggtaatgctaaacggacaacaacaggactggac
tttaatcgtgttagtttgattatggcggttttggagaagcgctgcggccttttattgcaa
aatcaagatgcctatctcaaatcagctggtggtgtgcgcttagatgagcctgctattgat
ttagcggttgcggtagccattgcttccagttataaggaaaagccaaccaaccctcaagaa
tgttatattggtgaaattggtttgacaggtgaaattcgtcgtgttaatcgtatcgaacaa
cgtctcaatgaagctagtaagctcggttttaccaagatttttgtacccaaaaattccctg
tcaggtttaacgattccacaaggtattcaggtagttggtgtgacaactgttggtgaggtt
ttgaaaaaggtgtttgacgaagtaaataaaaactga
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