Streptococcus intermedius B196: SIR_1864
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Entry
SIR_1864 CDS
T02830
Name
(GenBank) hypothetical protein
KO
K20375
HTH-type transcriptional regulator, pheromone-responsive regulator
Organism
sib
Streptococcus intermedius B196
Pathway
sib02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
sib00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
SIR_1864
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sib03000
]
SIR_1864
Transcription factors [BR:
sib03000
]
Prokaryotic type
Helix-turn-helix
Other families
SIR_1864
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_19
Rgg_C
HTH_3
DUF5347
ATR13
DUF4239
ARM_TT21
ComR_TPR
Motif
Other DBs
NCBI-ProteinID:
AGU77195
UniProt:
T1ZH89
LinkDB
All DBs
Position
1953630..1954532
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AA seq
300 aa
AA seq
DB search
MRWDIGTVYKTIRKAKGITQQEICGDWISRSNLSKFESNQSVPSYETMEFLLHQIDMSFG
EFEYICDYYKPRTRQVIINQMSNHLSIVNNTELKKIAHLCEEHLKKVKHDLPIQNILSTI
NIIMEVREHNFSDKAKQLAEQIWTVLEKRDVWYESDFRLLGVILFFFPIETIQEITEKIL
TNLEKYNDYKNIKGTQASILFNLSTVYFLNNRLDDCQRITEMILPLAKQTKRYDKLGFAQ
VRLGICQGDDVLIQKGLQLLELTEETTLLENLKEEVKQHRTSHFSHVSRGTSAPSIETEK
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atgcgttgggatattggcacagtttacaagacgattcgaaaagcaaagggaatcacccag
caagagatttgcggagattggatttctcgctccaatctttccaagtttgaaagcaaccaa
tccgttcccagctatgaaaccatggaatttctgctccaccagattgacatgagttttggg
gaatttgaatatatttgtgattattataaaccgcggacaagacaagtgattatcaatcaa
atgtcaaaccacttatctattgttaataatacagaacttaaaaaaattgctcatctatgc
gaagaacatcttaaaaaagtcaaacatgatttgccaatccaaaatattctctccacaatc
aatattattatggaagtacgagagcataactttagcgataaagcaaaacaattggcagag
caaatttggaccgtcttagaaaagcgagatgtctggtacgaaagtgactttcgtctgtta
ggtgttattctcttcttctttccaattgaaaccattcaggagattaccgaaaaaattctc
accaatcttgaaaaatataatgattataaaaacatcaaaggaactcaagcctctatttta
ttcaatctttccaccgtttattttctcaataaccgccttgacgattgccagcgtatcacc
gagatgatcttaccgctcgccaagcaaacaaaacgatacgacaaactcggctttgctcag
gttcgcctgggtatttgccaaggagacgacgtccttatccagaaggggctccagttgctt
gagctgacagaagaaacgaccttgctcgaaaacttgaaagaagaagtcaaacagcatcgt
acttcccatttctctcatgtttcacgtggaacttcagcaccttcaatagaaacggagaag
taa
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