Saccharolobus islandicus LAL14/1: SiL_0170
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Entry
SiL_0170 CDS
T02620
Name
(GenBank) NMD protein affecting ribosome stability and mRNA decay
KO
K07562
60S ribosomal export protein NMD3
Organism
sic
Saccharolobus islandicus LAL14/1
Pathway
sic03008
Ribosome biogenesis in eukaryotes
sic03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
sic00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
SiL_0170
03008 Ribosome biogenesis in eukaryotes
SiL_0170
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sic03009
]
SiL_0170
Ribosome biogenesis [BR:
sic03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
SiL_0170
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GFIT
Motif
Pfam:
NMD3
DZR_2
Rpr2
Motif
Other DBs
NCBI-ProteinID:
AGJ61649
UniProt:
M9U3Q9
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All DBs
Position
145604..146317
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AA seq
237 aa
AA seq
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MSGKFCVLCGKQNVELIDSLCADCYVKSKKLIEVPKRITGKYCKICGAQWIKGKWIRTSA
TSLASVVEDIIIREVGNKIDIDKNVEEFAFDIKSIWKDPSGNSFATIEFRGNVRGKPFSQ
EAIISLEMERTLCDSCFRKKTRYYEAIVQLRSKGKIGIDDKKRAFFESFFSTSIVDNISD
VIEGREGVDYYFMSKSVARKLVSMISSIVDVEVNESYQNEKMKNGKREAKLVISLRI
NT seq
714 nt
NT seq
+upstream
nt +downstream
nt
atgtcagggaagttctgtgtgctatgcggaaagcaaaatgttgagctaatagactcactc
tgtgctgactgctatgtaaaatctaaaaaactgatagaagtacctaaaaggataaccgga
aagtattgcaagatctgtggtgcacaatggattaagggaaagtggataaggacttcagca
acatctctagcttcagtcgtggaggatattataataagagaagtggggaataagatagac
attgataaaaacgtagaggagttcgcatttgatataaagagcatatggaaggatccaagt
ggtaattcctttgctactattgaatttagagggaacgtaagaggtaagcccttttcccaa
gaggcgataattagtttagaaatggaaagaacattatgtgactcgtgctttaggaaaaag
acacgatattatgaggccatagttcaactgaggagtaaaggtaagattgggattgacgat
aagaagagagcgttcttcgaatcctttttctctacaagcatagtggataatatttctgat
gttattgagggtagagagggtgtggattattattttatgagtaaaagtgttgcaagaaag
cttgtatcgatgatatcttctattgttgacgttgaagttaatgagagttatcagaatgaa
aagatgaaaaacggtaaaagggaggcaaaactagttatttcattgaggatatga
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