Saccharolobus islandicus LAL14/1: SiL_1679
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Entry
SiL_1679 CDS
T02620
Name
(GenBank) Rad3-related DNA helicase
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
sic
Saccharolobus islandicus LAL14/1
Pathway
sic03022
Basal transcription factors
sic03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
sic00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
SiL_1679
09124 Replication and repair
03420 Nucleotide excision repair
SiL_1679
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sic03021
]
SiL_1679
03036 Chromosome and associated proteins [BR:
sic03036
]
SiL_1679
03400 DNA repair and recombination proteins [BR:
sic03400
]
SiL_1679
Enzymes [BR:
sic01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
SiL_1679
Transcription machinery [BR:
sic03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
SiL_1679
Chromosome and associated proteins [BR:
sic03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
SiL_1679
DNA repair and recombination proteins [BR:
sic03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
SiL_1679
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
ResIII
DEAD
PhoH
AAA_34
DpaA_N
TsaE
Stealth_CR2
Motif
Other DBs
NCBI-ProteinID:
AGJ63125
UniProt:
M9UFW5
LinkDB
All DBs
Position
complement(1550516..1552168)
Genome browser
AA seq
550 aa
AA seq
DB search
MELREWQSKIAEKIVEALRNNFLVSLQAPTGSGKTLFALYASFKVKPKVVFIVRTHNEFF
PVYRELSLHFKDKKYGFLVGKSSACVFSSSDVDPQDIYCNGCEIFNASTITITDPPKVSL
NRLKEEGKKLGFCPYYSLLESIKSADVVLLTYPYLFIPWLRESLDINWEDYVVVIDEAHN
IENISNIEEKKLNKRIIEMAISQTKSQNVRLILERLKENIEQIIYSEDKYILIEKEKLAS
IIPPNEEIETLAEEYEEVRKNMIKNKTVSRNYLGSILRFFDLVNDERVRVFSYSNSLVVK
YIIPSYFTDILNDEKITYMLMSGTMQPLDYLRNIIGITRKILYVDAEKVMKNRLTGTYEC
LISIDVTTTYSLRSEQMARKYASYLLKIFYNSRKHVLAIFPSYEFMRIVSKFLNVRYLAE
DAETNIEEIMSNLKKEKTIIMGIARGKLAEGIEIVENGSSLISDVAMVGIPYPPIDDYLK
IRIEEISKRLKKDISSELIGIQALIAVKQSIGRAIRGPMDSAIVWLLDKRYDSLWWKKEL
NCLNARKIKL
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
gtggaacttagagagtggcaaagcaaaatagctgaaaaaattgttgaagcattaagaaat
aattttttagtctcattacaagcacctactggtagcggtaagactctatttgcactctac
gcttctttcaaggttaagccgaaagtggtatttattgtcagaacccataatgagtttttc
ccagtctatagagaactatcactacattttaaagataaaaaatatggatttttagtcggt
aaatcttctgcatgtgtttttagttcttctgacgttgatccccaagatatatattgtaat
ggatgtgaaattttcaatgcatccacaattactataactgatccgccaaaggtaagtctg
aatagactaaaggaggagggtaaaaaattagggttttgcccatactactcgctattggag
agtataaaaagcgctgatgtggtactactcacttatccttatctgtttataccttggctt
agagaatccttagatattaattgggaggactatgttgtcgtgatagatgaggctcataat
atagagaatatttctaatatagaggagaaaaagttaaacaaaagaatcatagagatggca
atttctcaaactaaatcacagaatgtgagattaatattggaaaggctcaaggaaaacata
gaacaaataatttattcagaggataaatatatacttattgaaaaggagaaattagccagc
atcattcctcctaatgaggaaattgagactctagctgaggaatatgaagaagttagaaag
aatatgataaaaaataagacagtaagtaggaattatcttggttcgattttgaggtttttt
gatttagttaatgatgaaagagttagagttttttcatattcaaattccttggttgtaaaa
tatataataccctcctattttactgatatactaaacgatgaaaaaattacctatatgtta
atgtcaggtactatgcaacccttggattatcttagaaatattataggaattactagaaaa
atattatatgttgatgctgaaaaggttatgaaaaatagattaactgggacatatgagtgt
cttatatctatagatgttacaactacttatagtttaaggtcagagcagatggcacgtaaa
tacgcatcatatttattaaaaattttctataattccagaaagcatgttctagctatattt
cctagctacgagtttatgcgaattgtatctaaatttctaaatgtaagatatttggcagag
gatgcagaaactaatatcgaagagataatgagtaatctgaaaaaagaaaaaacaattata
atgggtatagcaaggggtaagttagctgaaggaattgaaatagttgaaaacggaagtagt
ttgatatcagatgtggcaatggtaggtatcccttatcctccaatagacgattacttaaag
atacgtattgaggagatatcaaaaagactgaaaaaagatatcagtagcgaactaataggc
atacaagcattaattgcagtaaaacaatccataggtagggccatcagaggtccaatggat
agcgcaattgtatggcttctcgataaaagatatgacagtctatggtggaagaaagaactt
aattgcttgaatgcaaggaaaattaaactgtga
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