Saccharolobus islandicus M.16.4: M164_0063
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Entry
M164_0063 CDS
T00906
Name
(GenBank) Rad50 zinc hook domain protein
KO
K03546
DNA repair protein SbcC/Rad50
Organism
sid
Saccharolobus islandicus M.16.4
Brite
KEGG Orthology (KO) [BR:
sid00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sid03400
]
M164_0063
DNA repair and recombination proteins [BR:
sid03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
M164_0063
Archaeal homologous recombinant proteins
M164_0063
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
Rad50_zn_hook
SMC_N
AAA_15
AAA_21
AAA_13
ABC_tran
AAA_27
GAS
AAA_29
SbcC_Walker_B
HH_CyaD
TMF_TATA_bd
Filament
Nuf2_DHR10-like
Zw10_N
DUF7575
Laminin_II
ATG17_like
RsgA_GTPase
Motif
Other DBs
NCBI-ProteinID:
ACR40699
UniProt:
C4KJH9
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All DBs
Position
complement(52927..55521)
Genome browser
AA seq
864 aa
AA seq
DB search
MRIDKITLTNFLSHEHSEIHFLGEINVIVGQNGAGKSSIIDGIVFSLFRTHSRGNNDNLI
RKGSNKASVTLHLSNEKDKIEIIRDIRSTTEDRLIRNQIPVARSATVVSNEIEKILGIDK
DIALSTIIVRQGELDKILENLQDIMGKILKLESIEKLIDSRGPIVEFKKNLENKLRELDK
IEQDYNDSKKNLEEKRNRVLELEKDRKKLEDEIKNLENQITELKKQFEDYEKKRNQYLEL
TTILKVKETKLNELNKSIEELRRQTENMDKLEKEVNELDNLKNFRLKFEKYEVLSRSYIE
ISNNILNLEKEIEEYEKAIKRKKELEPHYLRYKELERKLEELQPKHEEYLKSKSNLDSKL
NLKERLEKDASEFSKDIDRISNLEQIMEEKRKRQLDLRAQLGKVESLISEKNEIINNLSQ
VKGETCPVCGRPLDEEHKQKIVEEAKSYISRLELDKNELEEELKKTTDELNKIEKEYRKL
SNNKANYDNVIKQLRKLNEEIENLHNRIEALKDIEEEIKKINVEIKDLKQYYEEFMRLFK
YDEKELERKKNRLDEMNKKKVEIEKEMRALETELQGLDRKELENKISDLERKKKILDEMK
KKRGVLEDYIGQVELLQEDVKKLREKLNIIQFDENKYNELKTSLDVHNASLKEKENRKSR
VEGELDSLGKDIEEISNRIKNYELQLKDKEKIINGINKLEKIRDALGERKLQSYIIMATK
QLIENNLNDIISKFDLSIKNVEMEIMPKTSRGKGSGGNIVIYTNNGDTLPIVSLSGGERI
ALSIALRLAIAKALMSNTNFFILDEPTIHLDDQRKAYLIEIIRAAKESVPQILVVTHDEE
VVQAADYVIRVEKRGNKSFVREET
NT seq
2595 nt
NT seq
+upstream
nt +downstream
nt
atgagaattgacaaaattactttgactaattttttaagtcatgaacacagtgaaatacac
tttctaggcgaaataaatgtaatagtgggacaaaatggagcaggtaagagttctataata
gatggcatagtattcagtttgtttagaacccatagtagaggaaataacgacaacttaata
agaaaaggttcaaataaggcgagcgttaccttacatctttctaatgaaaaagataaaata
gaaataataagggatataagaagcactacagaagataggttaatacggaatcaaatacca
gttgcacgtagtgcaacggtagtctctaatgaaatagagaaaattctgggtattgataaa
gatattgccctatcaacaataatagttagacaaggagaattggataaaattttggagaat
ttacaagacattatggggaaaattctaaagttggaatcaatcgagaagcttattgatagc
agaggtccaatagtggaatttaagaagaatttggaaaacaagttaagagagttagacaag
atagaacaagactataatgattctaagaaaaacttggaggagaagagaaatagagtgttg
gagttagaaaaagataggaaaaaactggaggatgagataaagaacttggaaaatcaaata
actgagttaaagaaacaattcgaagattatgagaagaaaagaaatcagtacttagagttg
accactatcttaaaggtaaaagaaactaaattaaatgaattaaacaagagtatagaagaa
ctaagaagacaaacggaaaacatggataagctagaaaaggaggtaaacgaacttgacaat
ttaaagaattttagattaaaatttgaaaaatatgaagttttatcgagaagttatatagag
atatccaataatatacttaatttagaaaaggaaattgaggaatatgaaaaagctattaaa
agaaagaaagaacttgagccacattatctaagatacaaggaattggagagaaaactggaa
gaattacagccaaaacatgaagaatatctcaaatcgaaatccaatttagactccaaacta
aatttaaaagaacgtttagagaaagacgcaagtgagttttctaaagatatagatagaatt
agtaatcttgaacaaattatggaagagaaaagaaaaagacaacttgatcttcgagctcaa
ttaggtaaagttgaaagcctaatatctgagaaaaatgagataataaataatcttagtcaa
gttaagggggaaacttgtccggtatgtggaagacccctagatgaggaacacaaacaaaaa
atagtagaagaagcaaaaagttacatttcacgattagaattagataagaatgaactggaa
gaagaattaaagaaaaccactgatgaattaaataaaattgaaaaagaatatagaaaactc
tcaaataataaggcaaattacgataatgtaataaagcaacttagaaagttaaacgaggaa
atagagaatcttcataataggattgaagctttaaaggatatagaggaggaaattaagaaa
ataaatgtagaaataaaggacctaaaacagtattatgaagagtttatgagactatttaag
tatgacgagaaggaacttgaaagaaaaaaaaataggttagatgaaatgaacaagaaaaaa
gtagaaatcgaaaaagaaatgagggctctagaaaccgaattacaagggttagaccgtaaa
gagctggagaataaaatttcagatttagagaggaagaaaaaaatcttggatgaaatgaag
aagaaaagaggagtactagaagactatataggacaagttgagctactacaagaagatgtt
aagaaactaagggaaaaattaaatataatacagtttgatgaaaataaatataatgaactt
aaaacgagtttagatgtccataatgccagtcttaaggagaaggaaaacagaaaaagtaga
gtggagggcgaattggatagtttaggtaaagacatagaggaaataagtaatcgaattaag
aattatgaattgcaactaaaagataaagaaaagataatcaatggtattaataagctggag
aaaattagagatgcattaggagaacgaaaattacagagttatataatcatggcaacaaaa
caattaattgaaaataatctaaatgatataatatcgaaatttgatctatctattaaaaac
gtagaaatggagataatgccaaaaactagtagaggaaagggtagtggtgggaatatagta
atatacactaataacggcgatactttgcccatagtatcgcttagtggaggtgagagaatt
gccttatctatagctttaaggttagcaatagctaaggcactgatgagtaatactaacttc
ttcattcttgacgagccaacaattcatttagatgatcaaagaaaagcgtacttaatagag
ataattagggcagcaaaggaaagtgtacctcagatattagtggtaacacatgacgaggag
gtagtccaggcagctgattatgttattcgtgttgaaaagagaggaaataaaagttttgtg
agggaggagacttga
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