Saccharolobus islandicus M.16.4: M164_1259
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Entry
M164_1259 CDS
T00906
Name
(GenBank) TATA-box binding family protein
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
sid
Saccharolobus islandicus M.16.4
Pathway
sid03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
sid00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
M164_1259
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sid03000
]
M164_1259
03021 Transcription machinery [BR:
sid03021
]
M164_1259
Transcription factors [BR:
sid03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
M164_1259
Transcription machinery [BR:
sid03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
M164_1259
RNA polymerase III system
TFIIIB
M164_1259
RNA polymerase I system
SL1/TIF-1B
M164_1259
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TBP
DUF3378
RTT107_BRCT_5
Motif
Other DBs
NCBI-ProteinID:
ACR41863
UniProt:
C4KGZ9
LinkDB
All DBs
Position
1194712..1195257
Genome browser
AA seq
181 aa
AA seq
DB search
MATVTLEQSLDLYAMERSIPNIEYDPDQFPGLIFRLEQPKVTALIFKSGKMVVTGAKSTE
ELIKAVKRIIKTLKKYGIKIMGKPKIQIQNIVASANLHVNVNLDKAAFLLENNMYEPEQF
PGLIFRMDDPRVVLLIFSSGKMVITGAKREDEVSKAVKRIFDKLAELDCVKPIEEEEELE
L
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
gtggcaacagttacgttagagcaaagtttggatttatacgctatggaaagaagtatcccc
aacatagaatacgatccagatcaatttccaggattaattttcagattagaacagcccaag
gttactgctttaatatttaaatctggaaagatggtagtaactggggcgaaaagtacagaa
gaactaataaaggccgtaaagagaataattaagacacttaaaaaatatggtataaaaata
atgggcaaacctaaaatccaaatccaaaatatagttgcatccgctaacttacatgtaaac
gttaacttagataaagctgcattcttactggaaaataacatgtacgaaccagaacaattt
ccgggattaatttttagaatggatgatcctagagttgtactcctaattttcagtagtggc
aaaatggtaataactggggcaaagagagaagatgaagtatctaaagcagtaaagagaata
tttgataagctagcggagctggattgcgtcaaacccatagaggaagaagaagaattagag
ctctag
DBGET
integrated database retrieval system
