Saccharolobus islandicus M.16.4: M164_1400
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Entry
M164_1400 CDS
T00906
Name
(GenBank) exosome complex exonuclease 1
KO
K11600
exosome complex component RRP41
Organism
sid
Saccharolobus islandicus M.16.4
Pathway
sid03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sid00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
M164_1400
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sid03019
]
M164_1400
Messenger RNA biogenesis [BR:
sid03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
M164_1400
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
M164_1400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-ProteinID:
ACR42006
UniProt:
C4KHE2
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All DBs
Position
1314225..1314962
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AA seq
245 aa
AA seq
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MLQVERPKLILEDGKRIDGRKPDELRSIKIELGVLKNADGSAIFEMGNTKAIAAVYGPKE
MHPRHLSLPDRAVLRVRYHMTPFSTDERKNPAPSRREIELSKVIREALESAVLVELFPRT
AIDVFTEILQADAGSRLVSLMAASLALADAGIPMRDLIAGVAVGKADGVIVLDLNEPEDM
WGEADMPVAMMPSLNQVTLFQLNGNMTPEEFRQAFDLAVKGINIIYNLEREALKSKYVEF
KEEGV
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atgcttcaagtggagagaccaaaactaatccttgaagatggaaagcgaatagatggtaga
aagccagatgaattaaggagtataaagatagaattgggagttctcaaaaacgctgatggt
tcagcgatttttgagatgggaaatacaaaggctatagcagcggtttacggtccaaaagaa
atgcatccaagacacttatctcttccggatagggcagtattaagagttagatatcatatg
acaccattctctacagacgagcgaaagaatcccgcacctagtagaagagagattgagctt
tctaaggttataagagaagctttagaatcagctgttttagtggaattgtttccaagaact
gccatagatgtttttactgaaatattacaagcagacgcgggatccagattagtttcattg
atggctgcgtctttggcgttagctgatgctggaattcctatgagagatttaatagctggg
gtagctgtagggaaggctgatggagtaatagttctagatttaaatgaacccgaggatatg
tggggagaggctgatatgccggttgcaatgatgccttctttaaaccaggtgacgttattt
cagttaaatggtaatatgactccggaggaatttaggcaagcttttgatttagcagttaag
ggtataaatataatatataatttagagagggaggctctaaaaagtaagtatgtagagttt
aaagaagagggtgtatag
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