Saccharolobus islandicus M.16.4: M164_1714
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Entry
M164_1714 CDS
T00906
Name
(GenBank) tRNA intron endonuclease
KO
K01170
tRNA-intron endonuclease, archaea type [EC:
4.6.1.16
]
Organism
sid
Saccharolobus islandicus M.16.4
Brite
KEGG Orthology (KO) [BR:
sid00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sid03016
]
M164_1714
Enzymes [BR:
sid01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
M164_1714
Transfer RNA biogenesis [BR:
sid03016
]
Prokaryotic type
tRNA spricing factors
tRNA splicing endonucleases
M164_1714
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_int_endo
tRNA_int_endo_N
TSEN34_N
Motif
Other DBs
NCBI-ProteinID:
ACR42318
UniProt:
C4KIA4
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All DBs
Position
1572859..1573407
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AA seq
182 aa
AA seq
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MVKALLVGSKVLIPNVDESRYIYSNGFYGKAIGISKPKGPKDIIRPLELSLIESVYLAKK
GLIKVIDKNGEVLEYEKLYEYSSKIINKFDIMYRVYEDLREKGFIVRSGVKYGADFAVYT
LGPGLEHAPYVVIAVDIDEEITPHELLSFGRVSHSTRKRLVLALVDRKSESVRYIMFKWV
KM
NT seq
549 nt
NT seq
+upstream
nt +downstream
nt
atggtaaaagccttattggtgggatctaaggtattaatcccaaatgtagatgaatcaaga
tacatttattcaaacggtttctatggaaaggcaataggaatttctaagccgaagggccct
aaagatataattagacctttagaattatcattaattgaaagcgtctatctagccaaaaag
ggtttaattaaagttatcgataaaaatggtgaagttcttgaatatgagaaattatatgaa
tatagttctaaaataataaataaatttgatatcatgtacagagtttacgaagatctgagg
gaaaaaggattcatagttagatctggagtaaagtatggagcagattttgcagtatacacg
ttaggacctggattagaacatgcaccttatgtggttattgcagtggatattgacgaagaa
attactcctcatgagttattgagttttgggagagtctcccacagcacaaggaaaagatta
gtattggctctagtagatcgcaaaagtgaaagtgtgagatacataatgtttaaatgggtc
aaaatgtaa
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