Saccharolobus islandicus M.16.4: M164_1733
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Entry
M164_1733 CDS
T00906
Name
(GenBank) AAA family ATPase, CDC48 subfamily
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
sid
Saccharolobus islandicus M.16.4
Pathway
sid04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
sid00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
M164_1733
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sid03019
]
M164_1733
03009 Ribosome biogenesis [BR:
sid03009
]
M164_1733
04131 Membrane trafficking [BR:
sid04131
]
M164_1733
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sid04147
]
M164_1733
Messenger RNA biogenesis [BR:
sid03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
M164_1733
Ribosome biogenesis [BR:
sid03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
M164_1733
Membrane trafficking [BR:
sid04131
]
SNARE
SNARE associated proteins
Others
M164_1733
Autophagy
Aggrephagy
Other aggrephagy associated proteins
M164_1733
Exosome [BR:
sid04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
M164_1733
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
CDC48_2
RuvB_N
AAA_16
AAA_2
AAA_5
AAA_22
TIP49
AAA_14
AAA_33
nSTAND3
Vps4_C
AAA_28
AAA_18
IstB_IS21
RNA_helicase
Mg_chelatase
AAA_lid_PRS2_C
AAA_25
ABC_tran
NACHT
AAA_24
ATPase_2
DUF815
TsaE
NPHP3_N
AAA_3
AAA_17
AAA_7
Parvo_NS1
Molydop_binding
Zeta_toxin
AAA_11
ATP-synt_ab
PhoH
ATPase
NB-ARC
Bac_DnaA
Motif
Other DBs
NCBI-ProteinID:
ACR42337
UniProt:
C4KIC3
LinkDB
All DBs
Position
1587839..1590118
Genome browser
AA seq
759 aa
AA seq
DB search
MRKTYFKRFGKMINMSQQLKLRVVEARQRDVGRKVARITDYTMSRLGIENGDYVEITGPS
GSSLAQALIGDGIADNEIRIDGYIRKSIGVGIGDEVTVKKAQVQDASKVVLAPTQPISFS
QSFVEYVKDWLMDKPLSRGETISVPTYVGSIDFVVVSTQPSQSVRVTGRTSLEIRQEPVK
ETAAVPKVTWEDIGDLEDVKEKIREIVELPMRHPEVFQHLGIEPPKGVLLYGPPGVGKTL
LARALANEIGAYFTSINGPEIMSKFYGESEQRLREIFEEAEKNAPAIIFIDEIDAIAPKR
EEVTGEVEKRVVAQLLTLMDGIKGRGKVIVIGATNRPDAVDPALRRPGRFDREIEIRPPD
AKARKEILQVHTRNMPLAEDVDLDKISEQTHGYTGADLAALAREAAMNALRRFINERKIN
LEQEQIPVDVLKELKVTMQDFIDAMKFIQPTLLREVYVEVPKVKWEDIGGLEEAKQQLRE
AVEWPLKFPEMFEKLGIRPPKGILLFGPPGTGKTMLAKAVATESGANFIAVRGPEILSKW
VGESEKAVREIFRRARQTAPCVIFFDEIDSIAPMRGFTHDSGVTERIVNQLLSEMDGIQS
LNRVVVIAATNRPDILDPALLRPGRFDRLIYVPPPDEKARIEILKIYTKTLPIDSSVNLE
ELAKKLEGYTGADIEALARETTMKVLRQKYYECSNKAKKECKDQECSDKTIKNCMSNLEI
KITMQDFLDTMKIVTPSLTKADIMRYENMVKEIKRSVIG
NT seq
2280 nt
NT seq
+upstream
nt +downstream
nt
atgagaaagacttattttaaacgtttcggaaagatgattaatatgtcccaacaattaaaa
ttgagagtggtagaagctaggcaaagagatgttggtaggaaggtcgccagaataactgat
tacactatgagtaggttaggaatagagaacggtgattatgtagagattactgggccttca
ggatcttcattggcacaagcgttaataggagatggaatagcggacaatgagataagaata
gatggttacattagaaaatccataggagtgggtattggagatgaagttacagtaaagaaa
gcacaagtgcaagatgctagcaaggtagttttggctccaacacaacctatttcctttagc
caaagttttgtagagtatgtcaaagactggttaatggataaacctctaagcagaggagaa
acaatttctgttcctacttacgttggatccatagacttcgttgtagtttcaacacagcct
tcacaatctgtaagggttacaggtagaacttccttagagataagacaagaaccggtaaag
gaaactgcagcagtacctaaggtcacttgggaagatattggcgaccttgaagacgtaaag
gaaaaaataagagaaatagtagaacttccaatgagacatccagaagttttccagcatcta
ggaatagaaccacctaagggtgtattactatatggaccaccaggagttggaaaaacctta
ttggctagggcacttgctaatgaaataggtgcgtacttcacttcaatcaatggaccagaa
ataatgagcaaattctacggtgaaagtgaacagagactaagggaaatatttgaggaggct
gaaaagaacgcgccagctataattttcattgatgaaatagatgcgatagcaccaaagagg
gaagaagttaccggagaagtagagaaaagagtggtagcgcaattgttgactctaatggat
ggaattaaaggaagaggaaaagtaatagtcataggagcaactaatagaccagatgctgta
gatccggcattaagaagaccaggtagatttgatagggaaatagagattagaccgcctgac
gctaaggctagaaaagagattctacaagtacatactagaaatatgcctctagctgaggat
gtggatttagataaaatctccgaacagactcacggctacactggagctgatctagcagct
ctagctagagaagcagcaatgaatgccttaagaaggtttattaatgaacgcaaaattaat
ctagaacaagaacaaataccagtcgatgtcttaaaggaattgaaagtaaccatgcaagat
ttcattgacgccatgaaattcatccaaccaacactccttagagaagtatatgtggaagtg
ccaaaagttaaatgggaggatattggaggattggaagaagctaaacagcaattaagagaa
gctgttgagtggccattaaaattcccagaaatgttcgaaaagcttggtattagaccacct
aagggtatattattatttggtccaccaggaactggaaagacgatgcttgcaaaggctgtt
gcaactgaaagcggagcaaacttcatagcagtgagaggaccagaaatattatccaaatgg
gtaggtgaaagtgaaaaagcagttagggaaatatttaggagggcaaggcaaacggctcct
tgtgtaatattctttgatgaaatagattcgattgctcccatgagaggctttacacacgat
tccggtgtaacagaaagaatagtaaatcagttactatcagaaatggatggaatccaatcg
ctaaatagagttgtagttatagctgcaactaatagaccagatattctagatccagctctg
ttaagaccgggtcgatttgatagattaatatatgtccccccacctgacgaaaaggctaga
atagagatactcaaaatttacactaaaacactacccatagattccagtgtgaacctagag
gagttggccaaaaaacttgagggatatactggagctgatatagaggctttagctagggaa
accacaatgaaagtattaagacaaaagtattatgagtgttcaaataaagctaaaaaggag
tgtaaagaccaagagtgtagtgataagaccataaagaattgtatgagcaatctggaaata
aaaatcactatgcaagacttcctagataccatgaagattgtaacgcctagtctgactaaa
gctgatattatgagatatgaaaacatggtaaaggaaataaagagatcggtgattggttga
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