Sideroxydans sp. CL21: SIDCL21_0966
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Entry
SIDCL21_0966 CDS
T09835
Name
(GenBank) source:FIG; ID:fig|6666666.470149.peg.966
KO
K03286
OmpA-OmpF porin, OOP family
Organism
side
Sideroxydans sp. CL21
Brite
KEGG Orthology (KO) [BR:
side00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
side02000
]
SIDCL21_0966
Transporters [BR:
side02000
]
Other transporters
Pores ion channels [TC:
1
]
SIDCL21_0966
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Ortholog
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GFIT
Motif
Pfam:
OmpA
OmpA_membrane
OMP_b-brl
DUF748
Porin_4
DUF5723
Motif
Other DBs
NCBI-ProteinID:
VVC83006
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All DBs
Position
1:967083..968567
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AA seq
494 aa
AA seq
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MKLSRTSVSMGVAAVAICASQFAAADDSFWYIGGNIGQSRAKIDDARIANQLLGAGLASP
SIANDDNHSAYKLFGGYQLNKNFALEASYFDLGQFGYTATTVPAGTLNGNIKLRGVGMDM
VGILPLTQKFSAFGRLGMNYAQAQDSFSSTGSVASPTIPNPSKNALNYKAGLGLQYDVTK
AFGLRAEAERYRIDDAVGNKGDINMISVGLVYRFDEKKPAPVQKEAPAPAPVVEAAPIFV
IVPVIKLQRYCSILDIQFEIKQDEIQREEKEKLAVVGTFLNKYPDTTAVIEGHTDNVGSS
EYNLKLSLRRAEAVVSYLVDTLHIAPARLSAVGYGEARPIADNSTREGQQMNRRIDAVIA
CATDVAGLKVVPARMTMALEMDFDPNKTDIQPQYYGELHEVANFMKANPDVTAAVEGHSS
NMVGKVHISAEKSMEISSLRANKVMDYLVEKEGISRSRLSAEAYGRTRRVAYGTTLEGQQ
ENRRVNIIFNYPKK
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atgaaattatcaagaacatcagtatccatgggagtggcggcagtcgcgatatgtgccagt
caatttgcagccgcagacgattcattctggtatatcggtggcaacatcggccaatccaga
gcgaagatcgacgatgcaaggatcgccaaccagttgctgggagcagggttggcctcgcct
tcgatcgctaacgacgacaaccactcagcctataaactcttcggcggttatcagctgaac
aagaattttgcccttgaagcaagttattttgatttggggcagtttggttataccgcgacc
acagtaccggccggaacgctcaacggcaatatcaaactccggggcgtgggtatggatatg
gtaggcatccttcctctgacgcaaaaattttccgcgtttggcaggttgggcatgaactat
gcgcaagcccaggatagtttttccagtacgggttctgttgcatcgccgactattccgaat
cccagcaagaatgcactcaattacaaggcgggcctggggcttcaatatgatgtcaccaag
gctttcgggctgcgcgccgaagcagaacgctaccgcatcgatgatgccgtgggcaacaag
ggcgatattaatatgatctcggtcggtctggtctatcgcttcgacgagaaaaaaccggct
cctgttcagaaagaagcaccggctccggctcctgtcgttgaagcagcaccgatcttcgtt
atcgtgccggtcatcaagctgcaaagatactgcagcattctcgacatccagttcgagatc
aagcaggacgagattcagcgcgaagagaaggaaaagctcgctgtcgtgggaaccttcctg
aacaagtatcccgacaccaccgcagtgatcgaggggcacaccgacaacgtcggctcaagc
gaatacaacctgaaactctccttgcgcagggctgaggccgtggtgagctatctggtggat
acgcttcatatcgcaccggcgcgtttgtcggcagtgggatacggagaggctcgccctatt
gcggacaacagcaccagggaaggtcagcagatgaaccggcgtattgatgctgtcatcgca
tgcgcgacggacgtcgccggtctcaaggtggtacccgcgaggatgaccatggcgttggaa
atggatttcgacccgaacaaaaccgatattcagccgcagtactacggcgagttgcatgaa
gtggcgaatttcatgaaagcaaatccggatgtgaccgccgcagtggagggacactcatcc
aatatggtcgggaaagtccatatctccgcggaaaaatccatggaaatatccagtcttcgt
gccaataaagtgatggattatctggtcgagaaagaaggcatttcccgttcaagactttcc
gctgaggcatacggccgcactcgccgggttgcttacggtacgacgttggaaggccagcag
gaaaaccgcagggtcaacatcatcttcaattaccccaagaaataa
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