Sideroxydans sp. CL21: SIDCL21_1864
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Entry
SIDCL21_1864 CDS
T09835
Name
(GenBank) source:FIG; ID:fig|6666666.470149.peg.1864
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
side
Sideroxydans sp. CL21
Pathway
side03030
DNA replication
side03430
Mismatch repair
side03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
side00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SIDCL21_1864
03430 Mismatch repair
SIDCL21_1864
03440 Homologous recombination
SIDCL21_1864
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
side03032
]
SIDCL21_1864
03400 DNA repair and recombination proteins [BR:
side03400
]
SIDCL21_1864
Enzymes [BR:
side01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SIDCL21_1864
DNA replication proteins [BR:
side03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SIDCL21_1864
DNA repair and recombination proteins [BR:
side03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SIDCL21_1864
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
DNA_pol_A_exo1
zf_C2H2_ZHX
Motif
Other DBs
NCBI-ProteinID:
VVC83904
LinkDB
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Position
1:complement(1909569..1910270)
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AA seq
233 aa
AA seq
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MRQIVLDTETTGLDPRQGHRIIEVAAIELNGRKVSDRTFHRYINPEREIDEGAAAVHGLT
LDRLQNEPKFAEIAAALLEFIAGAELIIHNAPFDIGFLNAELSLAGLPTLNNPVIDTLKV
AKELHPGKKNNLNALCDRYQIDNSHRTLHGALLDTELLAEVYLGMTRGQESLLGEESSDA
DGVQFTAAGEAICLSVRVLSASEDELSLHNAQLEDIEKASKGACVWKRLEGRA
NT seq
702 nt
NT seq
+upstream
nt +downstream
nt
atgaggcagatcgtactggataccgagacgaccggtctcgatccaaggcagggacatcgc
atcatcgaagtggcggccatcgaattgaacggacgcaaagtgtcggatcgcacttttcac
cgttacatcaatccggaacgcgagatagacgaaggcgcggcggcagtgcacggcctgacg
ctggatcgattgcagaacgagccaaagtttgccgaaatcgctgctgcactgctggaattc
atcgccggagcagagctcatcatccacaatgcacctttcgatatcggtttcctcaatgcg
gaattatcgttggccggactgccgacactgaacaatccggtgatcgacaccctgaaagtt
gccaaggagttgcaccccggcaagaagaacaacctgaatgcgttgtgtgaccgctaccag
atcgataactctcaccgcaccttgcacggggcgttgctggatactgaattacttgcggaa
gtatatctgggcatgacgcgcgggcaggaaagcctgctgggcgaagaaagcagcgatgcg
gatggtgtgcaatttactgcagccggcgaagcgatctgcttgagcgtccgggtactgtct
gcaagcgaggatgagttgtcgctgcataatgcacaattggaagacattgaaaaagcaagc
aagggagcgtgtgtatggaaaaggctggaaggacgggcgtga
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