Sideroxydans sp. CL21: SIDCL21_2716
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Entry
SIDCL21_2716 CDS
T09835
Name
(GenBank) source:FIG; ID:fig|6666666.470149.peg.2716
KO
K02584
Nif-specific regulatory protein
Organism
side
Sideroxydans sp. CL21
Pathway
side02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
side00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
SIDCL21_2716
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
side03000
]
SIDCL21_2716
Transcription factors [BR:
side03000
]
Prokaryotic type
Helix-turn-helix
Other families
SIDCL21_2716
BRITE hierarchy
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
GAF
GAF_2
HTH_8
AAA_5
GAF_3
AAA_2
AAA
Mg_chelatase
AAA_16
AAA_7
AAA_3
HTH_23
Parvo_NS1
Kinesin
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
VVC84756
UniProt:
A0A5Q4Z5G2
LinkDB
All DBs
Position
1:2753616..2755169
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AA seq
517 aa
AA seq
DB search
MPNDRIERRAGHEVDLLRSELDTLYQVSKVLSRSLNLKETLDGVLHALHEGVALERGMVS
LIDAASGELQVSLVYGVSDAVTEEVSYQPGEGVVGTILKTGSSIVVESIMDEPRFLSRMG
IYDPRGAFVGVPIRVGQKVIGVLAAQPAPSINRQLGEYQHFLEMVGNLIGQSVRLSQEVA
QEKKEIVEERDVLRRTVRGQYGFDNIIGHTQPMRRIFEQVRLVAKWNTTVLIRGETGTGK
ELIANAIHYNSPRARGSFVKLNCAALPETLLESELFGHEKGAFTGAVAQRKGRFEQAEGG
TVFLDEIGEISASFQAKLLRVLQEGELERVGGTKTIKVDVRVVAATHRDLEAEVEKGRFR
EDLYYRLNVMPLYLPPLRDRMEDIPEIARFLVEKVSTQQGRQLNLTDAALRILMHHDWPG
NVRELENCLERASVMTEGNTIDRDAILLTGIDEKISASRGAIQDLDLDDPNLDEREKVIA
ALEQAGWVQAKAARLLDMTPRQIAYRIQTLNIKVRQI
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atgcccaatgatcgtattgaaagaagggccggacacgaagtcgacctgctgcgttccgaa
ctggacacgctgtaccaggtaagcaaggtattgtcgcgttcgctcaacctcaaggaaacg
ctcgacggcgtgctgcatgcgttgcacgagggtgtggcactggaacgcggcatggtcagt
cttatcgacgcggccagcggcgaactgcaggtgtcgctggtatatggcgtttcggacgcc
gtcaccgaggaagtcagttatcagcccggcgaaggcgtagtcggcaccatcctgaagacc
ggcagcagtatcgtggtcgaatctatcatggatgagccgcgcttcctgagccgcatgggc
atctatgatccgcgaggcgctttcgtcggcgtacccatccgcgtcggccagaaagtgatc
ggcgtgctggcggctcagcccgcgcccagcatcaacagacaactcggcgaataccagcac
tttctggaaatggtcggcaatctgatcggccagagcgtgcgcctgtcgcaggaagtggcg
caggaaaaaaaggagatcgtcgaagaacgggatgtgctgcgccgcaccgtgcgcggccag
tacggcttcgacaacatcatcggccacacccagccgatgcgccgcatcttcgagcaagtg
cggctggtggcgaagtggaacaccacggtgctgatacgcggcgagaccggtaccggcaag
gagttgatcgccaacgccatccattacaactcgccgcgcgcgcgcggaagcttcgtcaag
ctcaactgcgcagccttgccggagaccttgctggaatccgaattgttcggccacgagaaa
ggggcgttcacaggagccgtggcgcaacgcaaggggcgcttcgagcaagctgaaggcggc
acagtgttcctcgacgagattggcgagatctccgcctctttccaggccaagctgctgcgc
gtgctgcaggaaggcgaactggaacgcgtcggcggcacaaaaaccatcaaagtggatgtg
cgcgtggttgccgccacgcaccgcgacctggaagcggaagtggaaaaaggccgcttccgt
gaagacttgtattaccgccttaacgtcatgccgctgtacttgccgccgttgcgcgaccgc
atggaagacatccccgagatcgcacgattcctggtggagaaggtcagtacgcaacagggc
agacagctcaacttgaccgatgccgcactgcgcatactcatgcaccatgactggcccggc
aatgtgcgcgaactggaaaactgtctggaacgcgcttcggtgatgaccgaaggcaacacg
atagaccgcgatgccatcctgctcaccggcatcgacgaaaaaatatcggcaagccgcggc
gcaatccaggatctcgatctcgacgaccccaatctcgacgaacgcgaaaaagtcatcgcc
gcgctggaacaggccggctgggtgcaagccaaggccgcgcgcctgctcgacatgacaccg
cgccagattgcgtaccgcatccagacgctgaacatcaaggtgcggcagatttaa
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integrated database retrieval system
