Sideroxydans sp. CL21: SIDCL21_3139
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Entry
SIDCL21_3139 CDS
T09835
Name
(GenBank) source:FIG; ID:fig|6666666.470149.peg.3139
KO
K01159
crossover junction endodeoxyribonuclease RuvC [EC:
3.1.21.10
]
Organism
side
Sideroxydans sp. CL21
Pathway
side03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
side00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
SIDCL21_3139
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
side03400
]
SIDCL21_3139
Enzymes [BR:
side01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.10 crossover junction endodeoxyribonuclease
SIDCL21_3139
DNA repair and recombination proteins [BR:
side03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
SIDCL21_3139
RecFOR pathway proteins
SIDCL21_3139
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvC
DUF460
Motif
Other DBs
NCBI-ProteinID:
VVC85179
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All DBs
Position
1:complement(3144117..3144674)
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AA seq
185 aa
AA seq
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MSHPSPFPLPPSRIRILGIDPGLRITGFGVLDKEGQQLHYVASGCIKTPDGELPERLKAI
LSGLGEVIALHKPEQVAVEKVFVNVNPQSTLLLGQARGAAICAAVLAGLSVAEYTALQVK
QAVVGNGHAGKEQVQAMVQRLLKLSGTPSPDAADALACAICHAHGGMGLGALATKGFRVR
GGRLV
NT seq
558 nt
NT seq
+upstream
nt +downstream
nt
atgagccacccttcccccttccctcttcccccttctcgtataaggattttaggcatcgac
cccggcttgcgcattacgggatttggtgtgttggataaagaaggccaacagttgcactat
gttgccagcggttgcatcaagacgcctgacggcgaactgcctgagcgattgaaagccatc
ttgagcgggttgggcgaagtcattgcattgcataagccagaacaagtggcggtggaaaaa
gtgttcgttaacgtgaatccgcagtcgactttattgttggggcaggcgcgcggcgcggcc
atctgtgcggcggtactggcgggactttcggtggccgaatataccgcgctgcaagtgaag
caggcggtcgtcggcaacggccatgccggcaaggagcaagtgcaggcaatggtgcagcgc
ttgttgaaactgtccggcacacccagcccggatgcagcggacgcgctggcttgtgcgatc
tgccacgcacacggcggcatgggtctgggcgctttggcgaccaaaggttttcgagtccga
ggaggaaggctggtatga
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