Streptococcus intermedius JTH08: SCIM_0016
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Entry
SCIM_0016 CDS
T02156
Symbol
pcsB
Name
(GenBank) secreted antigen GbpB/SagA
KO
K21471
peptidoglycan DL-endopeptidase CwlO [EC:3.4.-.-]
Organism
sie
Streptococcus intermedius JTH08
Brite
KEGG Orthology (KO) [BR:
sie00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sie01002
]
SCIM_0016 (pcsB)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sie01011
]
SCIM_0016 (pcsB)
Peptidases and inhibitors [BR:
sie01002
]
Cysteine peptidases
Family C40
SCIM_0016 (pcsB)
Peptidoglycan biosynthesis and degradation proteins [BR:
sie01011
]
Peptidoglycan biosynthesis and degradation
Endopeptidase
SCIM_0016 (pcsB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CHAP
DUF3450
ZapB
Rootletin
APG6_N
YabA
AAA_13
HALZ
FCD
Motif
Other DBs
NCBI-ProteinID:
BAM22670
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All DBs
Position
27586..28773
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AA seq
395 aa
AA seq
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MFMKKKLLTSILLSTMVLTQGASLVNVHADSTDDKIATQDSKINSLTDQQKSAQAQVDQI
QSQVSSIQSQQEKLKSENEKLQAESAKLSAEIETLSKNIVARNKSLANQARSAQTSGTAT
SYINTIVNSKSITEAISRVSAMNEIVSANNKMLEQQKQDKKAISEKQVANNEAINTVIAN
QQTLANDAKTLSTKQAELKAAQLSLAAEKATAEGEKNSLLAQKAAAQKAAEEAAAQEASY
KAQQAAQAQAIASSGNTTFTAQVQALNHSSAPTVSHSTSRPTYNSSASTYPVGQCTWGAK
TLAPWAGDYWGNGAQWAASAAAAGFRTGSTPQVGAIISWNDGGYGHVAVVTAVESPTRIQ
VSEANYAGHQAIGNYRGWFNPAAAGQGSFTYIYPN
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
ttgtttatgaagaaaaaattacttacatcaatcttattaagtacaatggttcttacacag
ggggcatctcttgtaaatgtacatgcagattctactgatgacaaaattgctacacaagat
agtaaaattaacagtttgactgatcaacaaaaatcagctcaagctcaagtagatcaaatt
caaagccaagtttcatctattcaatctcaacaagaaaagttgaaatctgaaaatgaaaaa
cttcaagctgaatcagcaaaattatcagctgaaattgaaactttgtctaaaaatattgta
gcgcgtaataaatcattggctaatcaagcacgtagtgctcaaacaagtggcacagctaca
agctatattaatacaattgtaaattcaaaatctatcacagaagccatttcacgtgtttct
gcgatgaatgaaattgtttcagcaaacaataaaatgttggaacaacaaaaacaagataaa
aaagctatttctgaaaaacaagtagctaataatgaagcaatcaatactgttattgcaaat
caacaaacactggcaaatgatgcaaaaactttatctactaagcaagctgaactaaaagcg
gctcagttaagtcttgctgcagaaaaagctacggctgaaggagaaaagaactcactatta
gctcaaaaggcagcagcacaaaaagcagcagaagaggcagcagcacaagaagcatcttat
aaagcacaacaagcagcacaagctcaggcaatagcttcgtcaggtaatacaacatttaca
gcacaagttcaagctttaaatcattcttcagctcctacagtgtctcattctacttcgcgc
ccaacttataattcatctgcttcaacttatccagttggtcagtgtacttggggtgcaaaa
acattagctccgtgggctggtgattattggggtaatggtgctcaatgggcagcaagtgcg
gcagcagctggtttccgtacaggttcaacacctcaagttggtgctatcatttcatggaat
gatggtggttatggacacgttgctgtggtaacagctgtagaatctcctacacgtattcaa
gtatctgaagcaaactatgcagggcatcaagctattggaaactatcgtggttggttcaat
ccagctgctgcaggacaaggttcatttacttatatctatccaaattaa
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