Streptococcus intermedius JTH08: SCIM_0141
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Entry
SCIM_0141 CDS
T02156
Name
(GenBank) ribonuclease M5
KO
K05985
ribonuclease M5 [EC:
3.1.26.8
]
Organism
sie
Streptococcus intermedius JTH08
Brite
KEGG Orthology (KO) [BR:
sie00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sie03009
]
SCIM_0141
Enzymes [BR:
sie01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.8 ribonuclease M5
SCIM_0141
Ribosome biogenesis [BR:
sie03009
]
Prokaryotic type
rRNA processing factors
SCIM_0141
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF4093
Toprim
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
BAM22795
LinkDB
All DBs
Position
173037..173609
Genome browser
AA seq
190 aa
AA seq
DB search
MKEKISQVLVVEGRDDTANLKRYFDVETYETRGSAICQEDMKRIKRLHDLHGVIVFTDPD
VNGERIRRMIMTAIPSVQHAFLRRDEAAPKSRNKGKSLGIEHASYEDLKAALSQVTKNFE
KKTDFDITRSDLIRLGFLAGNDSRKRREFLGEELRIGYSNGKQLLKRLELFGISLAKVEK
VMAYYQESEN
NT seq
573 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaaaagatttctcaggttctagttgtagaaggtcgagatgatacggccaatctc
aaacggtattttgacgtcgaaacttacgaaacgagagggtctgcaatttgccaagaagat
atgaagcgtattaaacgtcttcatgacctgcatggagtgatcgtttttactgatccagat
gtcaatggtgagaggattcgtaggatgatcatgaccgctattcctagtgttcaacatgct
tttttaaggcgtgatgaagccgctcctaagtctagaaataaagggaagtcattggggatc
gagcatgcttcttatgaagatttaaaagctgctctttctcaggtaactaaaaattttgaa
aaaaagactgattttgatatcacacgttcagatttgattcgcttaggatttctggcaggc
aatgacagccgcaaacgtcgtgaatttttaggagaagaactccgcattggctattcaaat
gggaaacagttgcttaaacgcttagaattatttggaatcagtttagcaaaagttgagaag
gtgatggcgtattatcaagaaagcgaaaactaa
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