Streptococcus intermedius JTH08: SCIM_0322
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Entry
SCIM_0322 CDS
T02156
Symbol
aliB
Name
(GenBank) ABC-type oligopeptide transporter
KO
K15580
oligopeptide transport system substrate-binding protein
Organism
sie
Streptococcus intermedius JTH08
Pathway
sie01501
beta-Lactam resistance
sie02010
ABC transporters
sie02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
sie00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
SCIM_0322 (aliB)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
SCIM_0322 (aliB)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
SCIM_0322 (aliB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sie02000
]
SCIM_0322 (aliB)
Transporters [BR:
sie02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Oligopeptide transporter
SCIM_0322 (aliB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
BAM22976
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All DBs
Position
373134..375092
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AA seq
652 aa
AA seq
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MKSSKWIIATGIVLSAGILLAGCGKSSSSTSTYSYVYTQDPDTLNYLMANRATTSDVVTN
LVDGLLENDRYGNLVPALAKSWTVSKDGLTYTYKLRKDAKWYTSEGEEYAGVKAQDFVTG
LKYAADNKSEALYLVQDSVKGLDAYIKGETKDFSKVGVKAIDDYTVQYTLSRAETYWNSK
TTNNILFPVNAAFLKSQGKNFGSVKPSSILYNGPYLLKSLTAKSSMEFAKNPHYYDKKNV
HLDNIKLTYYDGSDQEALIRNFTEGAYSAARLYPNSSSFASVKKQYNNNIIYSLQDATSY
YYNFNLNRQSYHHTSKKTDAQKTATQEAVLNKAFRQAINFAYNRTSYGAQSNGKDGATKV
LRNTLVPPTFVSIGDKTFGDLVSSKLVKYGSEWSDMNLADAQDAYYNPAKAKVKFAQAKA
ELQAKGVQFPIHLDVPADQTSKIGVQWESSMKQSVESVLGKDNVVIDIQQMSSDELNNIG
YFANTAAQKDYDLYNGGWSGDYQDPSTYLDTLNTKNGGSLKNFGLEPGQENDKIKTVGLD
TYTTMLEEANAETNEMKRYEKYAEAQAWLIDSGLTMPNLSLGGTPSVTKTVPFSRSYSLV
GIKGGSSNYFKYVKLQDKIVTTKEYESAKKKWLKEKEASNKRAQDNYENHVK
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atgaaatcatcaaaatggattattgcaacgggaattgtactaagtgctggaattttattg
gctggttgtggcaagtcaagctctagcacatcgacatattcatatgtgtatacacaagat
ccagatacgctgaattatttgatggcgaatcgagcaacaacatcagatgttgttaccaat
ttagttgatggattattagaaaatgaccgatacgggaacttagttccagcacttgctaag
tcatggacagtctccaaagatggtttgacgtatacgtataaattacgtaaagacgcgaaa
tggtacacatcagaaggcgaagagtacgcaggtgtaaaagcacaagactttgtaactggt
ttgaaatatgctgcagataacaaatccgaagctctttaccttgtacaagactctgtcaaa
ggattagatgcgtatatcaaaggggagacaaaagatttttcaaaggtaggtgtaaaagct
attgatgattatacagtacagtatactctgagtcgtgcagaaacttattggaattcaaaa
acaaccaataacatcctcttcccagtcaatgcagccttcttaaaatcccaaggaaagaat
tttggttctgtaaaaccgagtagcattctttacaacggtccatatctgctgaagtctttg
acggctaaatcctctatggaatttgcaaaaaatcctcattattatgacaaaaagaatgtt
catttagacaatataaagttgacatattatgatggatcggaccaagaagcgcttattcga
aactttactgagggtgcttatagtgcagcccgtctttatccaaatagttctagttttgct
tctgttaagaaacagtataataacaatatcatctatagtttacaagatgcgaccagttat
tattataactttaacttaaatcgtcagtcctatcaccatacatctaagaaaacagatgca
caaaaaactgcaacacaggaggcagtactcaataaagcatttcgtcaagcaatcaatttc
gcctacaatcgaacgtcttatggtgcgcaaagcaatgggaaagatggagcgacaaaagta
ttgcggaatacacttgttccaccaacgtttgtttcaattggtgataaaacatttggggat
ctcgtatcttccaaattggtgaagtacggttcagaatggtctgatatgaatttggctgat
gcacaggatgcttactacaatccagcaaaagcaaaagtaaaatttgcacaagcaaaagca
gagttgcaagctaaaggagttcagttcccaattcatttggatgtaccggctgatcagaca
agtaaaattggtgttcaatgggaaagttctatgaaacaatctgttgagtctgttttagga
aaagataatgttgtcattgatattcaacaaatgagttcagatgaattgaataacattggc
tactttgctaatactgctgctcaaaaagattatgatttatacaatggtggatggtcaggg
gattatcaagatccgtcaacttatctagataccttgaatacaaaaaatggtggtagtttg
aagaactttggcttggaacctggtcaagagaacgataagataaaaactgttggtttggat
acctatactacaatgcttgaggaagcaaatgctgaaaccaatgagatgaagcgttatgag
aaatatgctgaagcgcaggcgtggttaattgatagtgggttgacaatgccaaatctttct
cttggaggaacaccatctgtgacaaagacagttccgtttagccgttcatattctttagta
ggaattaagggtggctcaagcaactactttaaatatgttaagttgcaagataaaattgtg
acgaccaaagaatacgaaagtgctaaaaagaaatggctgaaagaaaaagaagcttctaat
aaaagagcacaagataactatgaaaatcatgtaaaataa
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