Streptococcus intermedius JTH08: SCIM_0369
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Entry
SCIM_0369 CDS
T02156
Symbol
priA
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
sie
Streptococcus intermedius JTH08
Pathway
sie03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sie00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
SCIM_0369 (priA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sie03400
]
SCIM_0369 (priA)
Enzymes [BR:
sie01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SCIM_0369 (priA)
DNA repair and recombination proteins [BR:
sie03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
SCIM_0369 (priA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ResIII
DEAD
PriA_3primeBD
PriA_C
Helicase_C
Zn_ribbon_PriA
SLFN-g3_helicase
PIF1
Cas3-like_C_2
AAA_30
AAA_19
nSTAND_NTPase5
AAA_7
TrwB_AAD_bind
Motif
Other DBs
NCBI-ProteinID:
BAM23023
LinkDB
All DBs
Position
423329..425710
Genome browser
AA seq
793 aa
AA seq
DB search
MQIAKVIVDVPLMQTDRPYSYAVPKEFSTMLEIGMRVHVPFGKANRLIQGIVVGLVEERT
IGLKEIVEVLDFTPVLNEEQLWLAEELRKSVFAYKISILKAMLPGFLNSSYDKILHAQPA
LTKEDRMLIFGNVDQRHFSSLDKTLQAKVMRLTRQGAIQLEYQATDQKHIKTEKWYRVHH
ERLGQLDIPNRAKKKQALRSLLQNQTSLQRLADLKETFSREVIHYFIEQDVLQVIEKEVS
RSETYFENVSATSALVLNEEQKGAVQAITQQIGHTGKPFLLEGVTGSGKTEVYLQVIQEA
LSRGKTAIMLVPEISLTPQVTNRFISRFGKKVAILHSGLSNGEKYDEWRKVERGEAQVVV
GARSAIFAPLKNIGAIIVDEEHEASYKQDSNPRYHARDVALLRAKYNQAVLVLGSATPSL
ESRARAGKGVYHFLQLTKRANPQAQIPEVEIVDFRDYIGQNEASDFTPVLLEAIKDRLEK
KEQVVLMLNRRGYSSFVMCRECGTVDSCPNCDISLTLHMDTKSMNCHYCGFSKVIPHSCP
NCSSRSIRYYGTGTQKAYDELAETFPQARILRMDVDTTRKKGSHEQILKKFEERHADILL
GTQMIAKGLDFPNVTLVGVLNADTALNLPDFRSSERTFQLLTQVAGRAGRAEKAGHVIIQ
SYNPRHYAIVFAKNQDYEGFYAYEMGVRRQLSYPPYYFTVGITLSHKIEAEVIKKSYEVL
NLIRSGLSNKVQVLGPTPKPIARTHNLYHYQLIIKYRFEEHLQDVLNQVLDWTQEKDNQN
LRLIIDKEPQNFM
NT seq
2382 nt
NT seq
+upstream
nt +downstream
nt
atgcagattgcaaaggtcattgtagatgttcctctaatgcaaacggatagaccttatagt
tatgcagttccgaaagaattttcgactatgctagaaattggtatgcgtgtccatgtgcct
tttgggaaagctaatcgcctgattcaagggattgttgtagggttagtagaagaaaggacg
ataggattaaaagaaatcgtagaggtattggactttacaccagttttaaatgaggagcaa
ctgtggctagcagaagaattgagaaaatctgtctttgcttacaaaatttccatcttaaaa
gctatgttgcctggttttctaaactccagttatgataaaattctccatgctcagcccgct
ttgacgaaagaagatcgaatgcttatttttggcaatgtagatcagcggcatttttcatcg
cttgataaaacactccaagctaaggtaatgcgtctaacacggcaaggggcgattcaactc
gagtatcaggcaactgatcaaaagcatataaaaacagaaaaatggtatcgagtccatcat
gagagattaggtcagttggacattcctaatcgggcgaaaaaaaagcaagctttgcgatcg
cttttacaaaatcagaccagtttgcaacgtctagcagatctgaaagaaacgttttcacga
gaggttattcactattttatagaacaagacgttttgcaagtcattgaaaaagaggtgagt
cgctctgaaacatattttgagaatgtttcagcgacgtctgcattggtgttaaatgaagag
caaaaaggggctgttcaagctattactcagcaaatcgggcacacagggaagccatttcta
ctagaaggagtaacagggagtggcaaaacggaagtgtatttgcaggttattcaagaagca
ctcagccgtggtaaaacagctattatgttagttcctgaaatctctttgacaccgcaagtt
actaatcgctttatttcgcgttttggaaagaaagttgctattcttcattcgggactttct
aacggtgagaaatatgatgaatggcgcaaggttgagcgaggagaagcacaagttgttgtt
ggtgcgcgttctgctatttttgctccattaaaaaacattggtgcgattatcgttgatgag
gagcatgaggcaagctacaagcaagactccaatccacgctatcatgcacgagatgttgcc
ttgctacgtgcaaagtacaatcaagccgttttagtgctagggtcagcgaccccgagttta
gaaagtagagcgcgagctggcaagggagtttatcattttttacaattaactaaacgggcc
aatccgcaagctcagattcctgaagtagaaattgtggattttcgtgattatattgggcaa
aacgaagctagtgattttactccggttcttttagaagcaattaaagaccgattagaaaaa
aaagagcaagttgttttgatgttgaaccgacgaggctattctagttttgtcatgtgtcgt
gagtgtggtacggttgatagttgcccaaattgtgacatttctctgaccttgcatatggat
acgaaaagtatgaattgccactattgtggtttttcaaaggtgattcctcatagctgtccg
aattgttccagtcggagcattcgttattatggaacggggacgcaaaaggcttacgatgaa
ttagcagaaacttttccgcaagctcgaattttaagaatggatgttgatactactcgtaaa
aaaggtagtcacgaacaaattttgaaaaaatttgaggaaagacatgctgatattttgctg
ggaacacagatgattgcaaaaggtctagattttccaaatgtgactcttgtaggggtgcta
aatgcagatacagcgttaaatttaccagattttcgttcatctgagcgaacctttcaactt
ttaactcaggttgcaggacgtgcaggacgagctgaaaaagcaggacatgtgattattcaa
agttacaatccaagacattatgcgattgtctttgcaaagaatcaggattatgagggtttt
tatgcctatgaaatgggtgtcaggaggcaattatcctatccaccttattactttacggtg
gggattactttatcacacaaaatagaagctgaggttattaaaaagtcatacgaagtgtta
aacctgatacgttctggcttatcaaataaggttcaggtattgggcccaactcctaagccg
attgcccgtactcacaatctctatcattaccaattgattattaaatatcgttttgaagag
catttgcaagatgttttaaatcaggttttagattggacacaagaaaaggacaatcaaaac
ttacgtttaattatagacaaggaaccacaaaattttatgtga
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