KEGG   Streptococcus intermedius JTH08: SCIM_0627
Entry
SCIM_0627         CDS       T02156                                 
Name
(GenBank) RNA methyltransferase
  KO
K03215  23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
Organism
sie  Streptococcus intermedius JTH08
Brite
KEGG Orthology (KO) [BR:sie00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:sie03009]
    SCIM_0627
Enzymes [BR:sie01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.190  23S rRNA (uracil1939-C5)-methyltransferase
     SCIM_0627
Ribosome biogenesis [BR:sie03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    SCIM_0627
SSDB
Motif
Pfam: tRNA_U5-meth_tr Cons_hypoth95 Methyltransf_15 TRAM TRM5-TYW2_MTfase Methyltransf_31 MTS N6_N4_Mtase TRM Methyltransf_25 RrnaAD PrmA DOT1 PCMT UPF0020 Methyltransf_11
Other DBs
NCBI-ProteinID: BAM23281
LinkDB
Position
732070..733425
AA seq 451 aa
MLKKNDVIEVEIVDLSHDGAGIAKVEGLVFFVENALPSEKILMRVLKINKKIGFGKVEEF
LRTSDQRNENLDMAYLRTGIADLGHLSYPSQLAFKRKQVKDSLYKIAGLSNVEVSPTLGM
ERPLGYRNKAQIPVRRVNGQLETGFFRKNSHDLLPIEDFYIQDPVIDQVILFTRDLLRRF
DLKPYDEREKTGLIRNLVVRRGHYSGEIMVILVTTRPKILRVEQLIERLVEAFPAIESIM
QNINDQNTNTIFGKDWRTLHGRDYITDRMLNNDFQIAAPAFYQVNTEMAEKLYQTAIDFS
ELAADDVVLDAYSGIGTIGLSVAKQVKQVYGVEVIPEAVENSQKNAEINGITNTHYVCDS
AENAMANWSKQDIKPDVILVDPPRKGLTESFIESSVSMEPKKIIYISCNPATMARDIKLY
QELGYELKKVQPVDLFPQTHHVECVALLVKV
NT seq 1356 nt   +upstreamnt  +downstreamnt
atgttaaaaaagaatgatgtgatagaagttgaaattgtagatttgagtcatgatggtgca
ggaatagctaaggtagaagggttggttttctttgtagaaaatgccttaccaagtgaaaaa
atccttatgcgggttctcaagatcaataaaaaaatcggctttggcaaagtagaggagttt
cttcgcacttcagaccagcgtaatgagaatcttgatatggcttatctgcgtacaggaatt
gcggacttgggacatctgagctatccatctcagctggccttcaaacgcaagcaagtcaaa
gacagtctctataagattgctggtttgtccaatgttgaggtgtcgccgacacttggtatg
gagcggccactgggctaccgcaataaggctcagatacctgttcgtcgtgtcaatggacaa
ctggaaacaggatttttccgaaaaaattcccatgacctcctgccgattgaagatttctat
attcaggatccagttattgaccaagttatcctctttacacgcgacttgctccgtcgtttt
gatctcaaaccttacgatgagagggaaaagactggtctcattcgcaatctagttgttcgc
cgtggccattattctggtgaaatcatggtgattttggtaacaaccaggcccaagatcctc
cgagtggagcaactgattgagcgtttggtagaggcctttccagctatcgagtccatcatg
cagaatatcaacgatcagaataccaatactatttttggaaaagactggcgaacgcttcac
ggtcgagactatattacagaccgcatgctgaataatgacttccagattgctgcgccagcc
ttttaccaagttaataccgagatggcagaaaaactttatcagacagccattgacttttcc
gagctggcagcagatgatgtggtgcttgacgcttactcaggcatcgggactatcggtctg
tcagtcgctaagcaggtcaagcaagtctacggtgtagaagtgattccagaagctgtcgaa
aatagccaaaagaatgcagaaatcaacggcattactaatacccattatgtttgtgattca
gcagaaaatgctatggctaactggagtaagcaagacatcaagccagacgttattctggtt
gacccaccacgaaaaggcttgacagaaagcttcatcgaatccagtgttagtatggaacca
aagaaaattatctacatatcctgcaacccagcaaccatggcgcgtgatatcaagctctat
caagagctgggttatgaactaaagaaagtacagccggtggatctatttcctcaaacgcac
catgtcgagtgtgtagctctgctcgtgaaagtttag

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