Streptococcus intermedius JTH08: SCIM_0655
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Entry
SCIM_0655 CDS
T02156
Symbol
rgpA
Name
(GenBank) rhamnosyltransferase
KO
K12996
rhamnosyltransferase [EC:2.4.1.-]
Organism
sie
Streptococcus intermedius JTH08
Brite
KEGG Orthology (KO) [BR:
sie00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
sie01005
]
SCIM_0655 (rgpA)
Lipopolysaccharide biosynthesis proteins [BR:
sie01005
]
O-antigen repeat unit
SCIM_0655 (rgpA)
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Gene cluster
GFIT
Motif
Pfam:
DUF1972
Glycos_transf_1
Glyco_transf_4
DUF2345
Motif
Other DBs
NCBI-ProteinID:
BAM23309
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Position
762979..764127
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AA seq
382 aa
AA seq
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MQHVFIIGSRGLPAKYGGFETFVENLVGHQVSPQIQYHVACLSDKEAYHHFDYKGVDCFT
IQAPKFGPARVIAYDMMAINYALKLVKEQEIVQPVFYILGNTIGAFIAPFARKIHNAGGI
FYINPDGLEWKRAKWAKPVQAYLKYSEKLMTKHADLVISDNQGIEMYINKIYPWSKTTFI
AYGTDLNLSSLTDQTTKVRDFFNQWQSKEKNYYLIVGRFVPENNYESIICEFMKSQTQRD
LLIVCNHQGNAYFEELRQKTNFDQDERIKFVGTVYDQELLKYIRNQAFAYIHGHEVGGTN
PGLLEALAQTDLNLVLDVDFNHQVAKETAFYWQKADASLVALIDQVDMKADFSQLGQAAK
ENMKENYTWEKIVGEYEELFLS
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atgcagcatgtattcattattggaagtcgtggtcttcctgcaaaatatggtggatttgaa
acttttgtagaaaatttggttggacaccaggtttcaccacagattcagtatcatgtggct
tgcttgtcagataaagaagcctatcatcattttgactacaaaggcgtagattgttttacg
attcaagcaccaaaatttggtccagctcgtgttattgcctatgatatgatggcaatcaac
tacgctttgaagttagtgaaagagcaagaaatagttcaaccagttttttatattttagga
aatacaatcggagcttttattgcaccttttgctcgaaaaattcacaatgccggtggtata
ttttacatcaatcctgatggtctggaatggaagcgtgcaaagtgggcaaaaccagttcaa
gcttatctcaagtattctgaaaagttgatgactaaacatgcagatttggtaatttcagat
aatcaaggaattgaaatgtacatcaacaagatctatccttggtctaaaacgacttttatc
gcttatggaacagatttaaatttatcttctttgacagatcagactacaaaagtgcgtgat
ttttttaaccaatggcagagtaaagaaaaaaattattatttgattgttggacgttttgtt
ccagaaaataactatgaaagtatcatctgtgagtttatgaagtcacagacgcagcgagat
ttactgattgtctgcaatcatcaaggtaatgcttattttgaagaactacgacaaaaaaca
aattttgaccaagatgagcgaattaagtttgttggaacggtttatgatcaggaattattg
aagtacattcgtaatcaagcctttgcttatattcatggtcacgaagttggtggaaccaat
cctggcttgctggaggcgttggcgcaaacggatttgaacttggttttagatgtcgatttt
aatcatcaagttgcaaaggaaactgctttctattggcagaaagcagatgcatctttagta
gcattgattgaccaagtagatatgaaagccgatttctcccaattagggcaagctgccaaa
gaaaatatgaaagaaaactacacctgggaaaaaattgtgggtgaatacgaggaattattt
ttatcatga
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