Streptococcus intermedius JTH08: SCIM_0667
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Entry
SCIM_0667 CDS
T02156
Symbol
rmlB
Name
(GenBank) dTDP-glucose-4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
sie
Streptococcus intermedius JTH08
Pathway
sie00521
Streptomycin biosynthesis
sie00523
Polyketide sugar unit biosynthesis
sie00525
Acarbose and validamycin biosynthesis
sie00541
Biosynthesis of various nucleotide sugars
sie01100
Metabolic pathways
sie01110
Biosynthesis of secondary metabolites
sie01250
Biosynthesis of nucleotide sugars
Module
sie_M00793
dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
sie00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
SCIM_0667 (rmlB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
SCIM_0667 (rmlB)
01055 Biosynthesis of vancomycin group antibiotics
SCIM_0667 (rmlB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
SCIM_0667 (rmlB)
00525 Acarbose and validamycin biosynthesis
SCIM_0667 (rmlB)
Enzymes [BR:
sie01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
SCIM_0667 (rmlB)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
NAD_binding_4
3Beta_HSD
Polysacc_synt_2
RmlD_sub_bind
NAD_binding_10
NmrA
adh_short
Sacchrp_dh_NADP
KR
Motif
Other DBs
NCBI-ProteinID:
BAM23321
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Position
777046..778092
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AA seq
348 aa
AA seq
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MTEYKNIVVTGGAGFIGSNFVHYVYNNFPDVHITVLDKLTYAGNRANIEEILGDRVELVV
GDIADADIVDQVAKNADAIVHYAAESHNDNSLNDPRPFIDTNFVGTYTLLEAARKYNIRF
HHVSTDEVYGDLPLREDLPGHGEGPGEKFTPETKYNPSSPYSSTKAASDLIVKAWVRSFG
VKATISNCSNNYGPYQHIEKFIPRQITNILSGIKPKLYGEGKNVRDWIHTNDHSAGVWTI
LTKGQIGETYLIGADGEKNNKEVLELILKEMGQPADAYDHVTDRAGHDLRYAIDASKLRD
ELGWKPEFTNFEAGLKETIKWYTDHQNWWKAEKEAVEANYAKTQKVLK
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atgactgaatataaaaatattgtagtaacaggtggagcaggatttatcggttctaacttt
gttcattatgtgtacaataacttcccagatgtgcatatcacggttctggataagctaact
tatgctggtaatcgagctaacattgaagaaattctaggcgatcgagtggagttagttgtg
ggagacattgcagatgcagatattgttgaccaagtagctaagaatgcggatgctattgtt
cactatgcagcagaaagtcataatgacaattcgctaaatgaccctcgtccatttatcgat
acgaactttgttggaacttatacgcttcttgaagcagctcgtaaatacaacattcgtttc
caccatgtgtcgactgacgaagtttacggagatcttcctcttcgtgaagatcttccaggg
cacggtgaaggaccgggtgaaaaattcaccccagaaacgaaatacaatcctagttcgcct
tattcatctaccaaggcagcttcagacttgattgttaaagcttgggtacgctcatttggc
gtgaaagcgactatttctaactgttcaaacaactatggtccttaccagcacatcgagaag
ttcattccacgtcaaattactaatattctgagtgggatcaaaccaaaactctacggtgaa
ggaaagaatgttcgtgactggattcatacaaatgatcattcagcaggtgtttggacgatt
ctgaccaagggacagatcggtgaaacttacttgattggtgctgacggtgagaagaacaat
aaggaagtactggagctcattctcaaagaaatgggacagcctgctgatgcttatgatcat
gtgacagatcgtgctggtcacgaccttcgctatgcgattgatgctagcaagttgcgggat
gaactgggctggaaaccagaattcactaactttgaagctggattgaaagaaacaatcaag
tggtacacagatcaccagaattggtggaaagctgaaaaagaagctgtcgaagccaactat
gctaagactcaaaaagtgttgaaataa
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