KEGG   Streptococcus intermedius JTH08: SCIM_0679
Entry
SCIM_0679         CDS       T02156                                 
Symbol
rncS
Name
(GenBank) ribonuclease III
  KO
K03685  ribonuclease III [EC:3.1.26.3]
Organism
sie  Streptococcus intermedius JTH08
Brite
KEGG Orthology (KO) [BR:sie00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    SCIM_0679 (rncS)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sie03019]
    SCIM_0679 (rncS)
   03009 Ribosome biogenesis [BR:sie03009]
    SCIM_0679 (rncS)
   03036 Chromosome and associated proteins [BR:sie03036]
    SCIM_0679 (rncS)
Enzymes [BR:sie01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.3  ribonuclease III
     SCIM_0679 (rncS)
Messenger RNA biogenesis [BR:sie03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     SCIM_0679 (rncS)
Ribosome biogenesis [BR:sie03009]
 Eukaryotic type
  90S particles
   RNase
    SCIM_0679 (rncS)
 Prokaryotic type
  rRNA processing factors
   SCIM_0679 (rncS)
Chromosome and associated proteins [BR:sie03036]
 Eukaryotic type
  Gene silencing
   microRNA pathway
    Microprocessor complex
     SCIM_0679 (rncS)
SSDB
Motif
Pfam: Ribonucleas_3_3 Ribonuclease_3 dsrm RM44_endonuclase DND1_DSRM DSRM_2 HpcH_HpaI
Other DBs
NCBI-ProteinID: BAM23333
LinkDB
Position
789343..790041
AA seq 232 aa
MRDLHKVLNQQFGIAFQDEQLLETAFTHTSYANEHRLLNISHNERLEFLGDAVLQLLISE
YLYKKYPKKPEGDLSKLRSTIVREESLAGFSRDCQFDQFIKLGRGEEKSGGRNRDTILGD
LFEAFLGALLLDKDVEAVRTFLYQIMIPKVEAGDFEQVIDYKTKLQELLQVNGDVEILYQ
VVSETGPAHAKEFAVSVSVDGRVVGDGKGRSKKLAEQEAAKNAYEKENHSCI
NT seq 699 nt   +upstreamnt  +downstreamnt
atgagagatttacataaagttttaaatcagcaattcggaattgccttccaagatgagcaa
ttgctggaaacagcttttacgcatactagctatgctaacgagcaccgcctcttaaacatt
tcacataatgagcgcttggaatttttaggagacgctgttctacaattattgatttcagaa
tatctgtataaaaaatatccgaagaaaccagaaggagacttatcaaaacttcgatcgaca
attgtacgtgaagaaagtttggctggttttagtcgagattgtcagtttgatcaatttatc
aaattgggtcgtggcgaagaaaaatcaggtggtcgaaatcgtgataccattctcggcgat
ttatttgaggcctttttaggagcacttttgttagataaagatgtggaagctgttcggact
ttcctttatcagattatgattccaaaggtggaggctggggactttgagcaagtgattgat
tacaagacaaagctacaagaattgctccaagtaaatggtgatgtcgagattctctatcag
gtcgtttcagagactggtccggcacatgccaaagaatttgctgtatctgtctcagtagac
ggcagagtggttggtgacgggaaaggtcgttctaagaaactagcggagcaggaagccgca
aaaaatgcatatgaaaaggaaaatcattcatgtatttaa

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