Streptococcus intermedius JTH08: SCIM_0679
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Entry
SCIM_0679 CDS
T02156
Symbol
rncS
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
sie
Streptococcus intermedius JTH08
Brite
KEGG Orthology (KO) [BR:
sie00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
SCIM_0679 (rncS)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sie03019
]
SCIM_0679 (rncS)
03009 Ribosome biogenesis [BR:
sie03009
]
SCIM_0679 (rncS)
03036 Chromosome and associated proteins [BR:
sie03036
]
SCIM_0679 (rncS)
Enzymes [BR:
sie01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
SCIM_0679 (rncS)
Messenger RNA biogenesis [BR:
sie03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
SCIM_0679 (rncS)
Ribosome biogenesis [BR:
sie03009
]
Eukaryotic type
90S particles
RNase
SCIM_0679 (rncS)
Prokaryotic type
rRNA processing factors
SCIM_0679 (rncS)
Chromosome and associated proteins [BR:
sie03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
SCIM_0679 (rncS)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
DND1_DSRM
DSRM_2
HpcH_HpaI
Motif
Other DBs
NCBI-ProteinID:
BAM23333
LinkDB
All DBs
Position
789343..790041
Genome browser
AA seq
232 aa
AA seq
DB search
MRDLHKVLNQQFGIAFQDEQLLETAFTHTSYANEHRLLNISHNERLEFLGDAVLQLLISE
YLYKKYPKKPEGDLSKLRSTIVREESLAGFSRDCQFDQFIKLGRGEEKSGGRNRDTILGD
LFEAFLGALLLDKDVEAVRTFLYQIMIPKVEAGDFEQVIDYKTKLQELLQVNGDVEILYQ
VVSETGPAHAKEFAVSVSVDGRVVGDGKGRSKKLAEQEAAKNAYEKENHSCI
NT seq
699 nt
NT seq
+upstream
nt +downstream
nt
atgagagatttacataaagttttaaatcagcaattcggaattgccttccaagatgagcaa
ttgctggaaacagcttttacgcatactagctatgctaacgagcaccgcctcttaaacatt
tcacataatgagcgcttggaatttttaggagacgctgttctacaattattgatttcagaa
tatctgtataaaaaatatccgaagaaaccagaaggagacttatcaaaacttcgatcgaca
attgtacgtgaagaaagtttggctggttttagtcgagattgtcagtttgatcaatttatc
aaattgggtcgtggcgaagaaaaatcaggtggtcgaaatcgtgataccattctcggcgat
ttatttgaggcctttttaggagcacttttgttagataaagatgtggaagctgttcggact
ttcctttatcagattatgattccaaaggtggaggctggggactttgagcaagtgattgat
tacaagacaaagctacaagaattgctccaagtaaatggtgatgtcgagattctctatcag
gtcgtttcagagactggtccggcacatgccaaagaatttgctgtatctgtctcagtagac
ggcagagtggttggtgacgggaaaggtcgttctaagaaactagcggagcaggaagccgca
aaaaatgcatatgaaaaggaaaatcattcatgtatttaa
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