Streptococcus intermedius JTH08: SCIM_0680
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Entry
SCIM_0680 CDS
T02156
Symbol
smc
Name
(GenBank) structural maintenance of chromosome protein
KO
K03529
chromosome segregation protein
Organism
sie
Streptococcus intermedius JTH08
Brite
KEGG Orthology (KO) [BR:
sie00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sie03036
]
SCIM_0680 (smc)
Chromosome and associated proteins [BR:
sie03036
]
Prokaryotic type
Chromosome partitioning proteins
Condensin-like complex
SCIM_0680 (smc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_23
AAA_21
AAA_15
Rootletin
AAA_29
TolA_bind_tri
SbcC_Walker_B
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
BAM23334
LinkDB
All DBs
Position
790032..793565
Genome browser
AA seq
1177 aa
AA seq
DB search
MYLKEIEIQGFKSFADKTKIVFDRGVTAVVGPNGSGKSNITESLRWALGESSVKSLRSGK
MPDVIFAGTESRKPLNYASVVVVLDNKDRFIQQAADEIRVERHIYRSGDSEYKIDGKKVR
LRDVHDLFMDTGLGRDSFSIISQGKVEEIFNSKPEERRAIFEEAAGVLKYKTRRKETESK
LAQTQDNLDRLEDIIYELDSQVKPLEKQATTAKQFLKLDEERRSLYLDVLIAQITENKTQ
LNTTNEQLAGIQQDLSDYYNKRDQLEQENVLLKEKRHVLQKQMADDQASLLELTRLISDL
KRQIEVSKLESSQAASSRKENEERLQGLEEKRAVAQKEWQEKNEQLIGFSKELEQNQQAI
HKLEAEIETFSDNPDQMIEKLRGKFVQLMQEEADLSNDLTALESRLANELQLSESKQAEF
AKLQENLKNIQANEQSQLEDLETARQLVQQLLVDYQEQLKRVQSVKEDYQQSQAAMFDMM
DDVKNKKARIGSLEAILKNHSHFYAGVKSVLQEADRLGGIIGAVSEKLNFDPHYQTALEI
ALGGSSQHIIVEDEQSATQAIEFLKRNRTGRATFLPLTTIKARYLADYHRASIEKSTGFL
GLASSLVHYDKSLENIFQNLLGTTAIFDTVENARVAAHKVRYQVRIVTLDGTELRTGGSY
AGGTHRNNSTIFIKPELDALQKELSEKNVILAEQEKRVEDLHTLSIQSTNLLEEIKTDGE
EARLAEQKAQLAYEQTHKQVEDLSELLTLQERELSREVLPDMAEQKETLIRRLVEIEQEK
AETETEIEQIKSDKNAIQARLDKLTSRLSELRLTRTEVTGHQRYVQADLTRLSNEQAELD
KEISTLQFLMEQKEENVSKVDVSVLEEQLAKAEQEKTDLNQTTIRRQFELDDLEGQTEDL
TNHLEQARRKNEDLIRKQAKTEAEKDKIADVLRRLLTNLTDDYQMSFDEASKQAHSLENL
AISEGKVKDLEKAIRALGPVNLEAVDQFEEVSQRLHFLNTQRDDVLSAKNLLLDTIEEMN
DEVKERFKSTFEAIRESFKVTFKQMFGGGSADLILTEGDLLTAGVEISVQPPGKKIQSLN
LMSGGEKALSALALLFSIIRVKTIPFVILDEVEAALDEANVKRFGDYLNRFDKDSQFIVV
THRKGTMSASDSIYGVTMQESGVSKIVSVKLKDLESM
NT seq
3534 nt
NT seq
+upstream
nt +downstream
nt
atgtatttaaaagaaattgaaattcaaggtttcaaatcttttgcagacaaaactaagatt
gtttttgaccgaggagtgactgctgttgttggtccaaacggatcaggaaaatcgaatatt
acagaaagtttgcgctgggcgttaggagaatccagtgtaaaaagcctccgcagtggtaaa
atgccggatgtcatttttgctggtacagaaagtagaaagccattaaattatgcttctgtt
gttgttgtcttggacaataaagatcgtttcatccaacaagcggcagatgaaattcgtgta
gaacgtcatatttatcgcagcggagacagcgagtataaaattgatggcaaaaaagtgcgc
ttacgagacgtccatgacttatttatggatactggactgggacgagatagtttttctatt
atttctcaaggtaaagtggaagagatttttaatagtaagccagaggagcgccgtgccatt
tttgaagaagctgcaggtgtgttaaaatacaagacacggcgcaaggaaactgaaagtaaa
ttagctcaaacgcaggataatttagatcgtttagaagacatcatttatgagctagatagt
caagtgaaacctcttgaaaaacaagctacaacagctaagcagtttttgaaattagatgag
gagcgtcgttccctctacctagatgtgttgattgcacaaattacagaaaataaaacacaa
ttaaatacgacgaatgaacaattagcaggcattcaacaagatttatctgattattacaat
aaacgggatcagttggagcaagaaaatgttcttctaaaagaaaaacgacatgttttgcaa
aaacaaatggcagatgatcaagcaagtctattggaattaacacgtttaattagtgattta
aaacgtcaaattgaagtttcaaaattggagtctagccaagctgccagcagtcggaaagaa
aatgaagaacgcctacagggactagaagaaaaacgagctgtggctcaaaaagaatggcag
gaaaaaaatgagcaactgattggtttttcgaaagagttagaacaaaatcaacaggctatt
cataaattggaagctgaaattgagactttttcggataatcccgaccagatgattgaaaaa
ttacgcggtaaatttgttcaattgatgcaagaagaagcagatttgtcaaatgatctaact
gctttggaaagccgtttagccaatgaattacaattatctgaaagtaagcaagcagaattt
gccaagttacaagagaatttaaaaaatatacaagcaaacgagcagagtcaactagaagat
ttggaaacagctcgacagttggttcagcagttgttagtagattatcaggagcagcttaag
cgagttcaaagtgtgaaagaagattatcagcaaagtcaagcagcaatgtttgatatgatg
gatgatgtaaagaataaaaaggcacgcattggtagtttagaagctattctgaaaaatcat
agtcatttctatgccggagtaaagagtgttctgcaagaagcagaccgattaggtggtatt
attggtgctgttagtgagaagttgaattttgatccgcattatcaaaccgcactagaaatt
gcacttggcggaagtagccagcatattatcgttgaagatgagcagtctgcgacacaggca
attgaattcttgaaacgcaatcgaacaggacgggcgacttttttaccgttgacaacgatt
aaagcacggtacctagcagattatcatcgagcaagtattgaaaaaagcacgggttttctt
ggtttggcttcgtctttggtgcattatgataagagtttagagaatattttccaaaattta
ctgggaacaaccgctatttttgatacagtagaaaatgcgcgagtagctgctcacaaggtt
cggtatcaagtacgaattgtcacactggatggaacagaattgcggacaggcgggtcttat
gcaggcggtactcatcggaataacagtacgattttcatcaaaccagagcttgatgctctg
caaaaagaactttctgagaagaatgtgattttagcagaacaagagaagagagtggaagat
ttgcacacgctgtcaattcaatccacgaatcttttagaagaaataaaaacagatggcgag
gaagcacggttagccgaacaaaaggctcaattagcttatgagcaaacgcacaaacaagtt
gaagatttatctgagcttctgactttgcaagaacgcgagctatctcgcgaggtgcttcct
gacatggcagaacaaaaagaaacactaatcaggcgccttgtagagattgagcaggaaaaa
gctgaaactgaaacagaaatcgagcaaattaagtcagataaaaatgctattcaagcacgt
ttagataagttaacatcacgcttatctgagcttcgtttgactcgtacggaagtgacaggt
catcagcgttatgttcaggcagatctcacccgtttatctaatgaacaagctgaattggat
aaagagatttcaactttgcaattcttgatggaacaaaaggaagaaaacgtttcgaaagta
gatgtttctgttttagaagagcagttagcaaaggcagaacaagaaaaaactgatttgaac
caaacaaccattcgtcggcagtttgaattggatgatttggaaggtcagacggaagatctg
acgaatcatctagaacaagctcgccgaaaaaatgaggatttgattcgcaaacaagccaaa
acagaagctgaaaaagataagattgcagatgttcttcgtcgtcttttgacaaatttgaca
gatgattatcagatgtcctttgatgaagctagtaaacaagcacattcgctagaaaatctg
gcaatttctgaaggcaaagttaaggatttagagaaagccattcgagcgttgggaccagtc
aatcttgaggctgtggatcagtttgaagaagttagtcaacgtctccatttcctcaatacc
cagagagatgatgtactctctgcgaaaaatctgcttttggatacaattgaagaaatgaac
gatgaagtaaaagaacgcttcaaatcaacttttgaagcgattcgcgaaagctttaaagtg
actttcaaacagatgtttggcggtggttcagcagatttgattctgaccgaaggtgacctt
ttgactgcaggggttgaaatttctgttcaaccacctggcaagaaaatccaatcactcaat
ctgatgagtggtggtgagaaagctctgtcagctctggctttactcttctccattattcgc
gttaagacgattccatttgtcattttggatgaagtggaagctgcccttgatgaagctaat
gtcaaacgttttggagactatctcaatcgttttgacaaagacagtcagtttatcgtagtg
acacatcgtaaaggcacgatgtctgcatcagattccatttatggagtgacgatgcaagaa
tctggtgtgtcaaagattgtctccgttaaattaaaagatttagaaagtatgtaa
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integrated database retrieval system
