Streptococcus intermedius JTH08: SCIM_0701
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Entry
SCIM_0701 CDS
T02156
Symbol
rluD
Name
(GenBank) 23S rRNA pseudouridine synthase
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
sie
Streptococcus intermedius JTH08
Brite
KEGG Orthology (KO) [BR:
sie00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sie03009
]
SCIM_0701 (rluD)
Enzymes [BR:
sie01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
SCIM_0701 (rluD)
Ribosome biogenesis [BR:
sie03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
SCIM_0701 (rluD)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
BAM23355
LinkDB
All DBs
Position
817438..818334
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AA seq
298 aa
AA seq
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MQVKVEISGIRLDKVLADLTPLSRSLANEQIKSGQILVNGQVKKAKYAVKTGDVITYELP
EPETLEYVSENLPLDIVYQDEDVAVVNKAQGMVVHPSAGHTSGTLVNALMYHIKDLSGIN
GVLRPGIVHRIDKDTSGLLMIAKNDDAHIKLADELKAKKSLRKYWAIVHGNLPNDRGVIE
APIGRSEKDRKKQAVTAKGKPAITRFHVLERFGNYTLVELQLETGRTHQIRVHMAYIGHP
VAGDGVYGPRKTLKGNGQFLHARTLGFTHPKTGKIMEFTAEVPIVFQETLEQLRKGKK
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atgcaagtaaaggtagaaattagtggtataaggttggacaaggtgcttgctgatctgaca
ccattatcccgcagccttgctaatgaacaaatcaaaagtgggcaaatcttagtcaatgga
caagtgaagaaagcaaagtatgccgttaagacaggtgatgtgattacttacgaattgcca
gagcctgaaactctggaatatgtttcagaaaatctacctctagatattgtttaccaagac
gaagatgttgcagtcgtaaataaggctcaagggatggtggtacatccaagcgctggacat
acgagcggtacgttggtcaatgccctcatgtaccatatcaaggatttatctggcatcaat
ggtgttttacggcctggaatagtccatcggattgataaggatacatcaggcttacttatg
attgctaagaacgatgatgcccatatcaagctggctgatgaattaaaagctaaaaaatct
ctacggaagtattgggctattgtgcatggcaatttgccaaatgatagaggtgttattgaa
gcaccgattgggagaagtgaaaaagatcgcaagaagcaagctgttacagctaaaggtaaa
ccagcaatcactcgttttcacgttttagagcgctttgggaattatactttagtagaattg
caattagaaacaggtcgtacccaccaaatccgtgtgcacatggcttatattggtcatccg
gtagcaggggatggcgtgtatggaccacgaaaaaccttgaaggggaatgggcaatttttg
catgccagaacgcttggatttactcatcctaagacgggaaaaatcatggaatttacagca
gaagtgccgatcgttttccaagaaacgctagaacaattgcgaaaaggaaagaagtga
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