Streptococcus intermedius JTH08: SCIM_0715
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Entry
SCIM_0715 CDS
T02156
Name
(GenBank) multidrug ABC transporter
KO
K18888
ATP-binding cassette, subfamily B, multidrug efflux pump
Organism
sie
Streptococcus intermedius JTH08
Pathway
sie02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
sie00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
SCIM_0715
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sie02000
]
SCIM_0715
Transporters [BR:
sie02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
SCIM_0715
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
MMR_HSR1
AAA_22
RsgA_GTPase
AAA_29
SMC_N
AAA_23
Dynamin_N
AAA_16
AAA_15
AAA_14
DUF87
AAA_28
AAA_7
FtsK_SpoIIIE
AAA_25
DUF5906
Motif
Other DBs
NCBI-ProteinID:
BAM23369
LinkDB
All DBs
Position
831009..832757
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AA seq
582 aa
AA seq
DB search
MKTRYSTSRLKRLANDLLQQRWLFLLATVGTIVQVVLTIYLPILIGEAIDSVLFPDAGRY
LLPILSKMGIVIVANTVVQWLNPLIYNQLIYSYSQQLCNAVIQKIHHLPLAYLDRQGSGD
LVSRLTTDVEQLNNGLLMVFNQFFVGVLTILVTIVTMAKIDFFMMALVLLLTPLSMLIAD
FIARKSYKLFQKQTTARGLQTQFIEESLSQESLIQSFNAQEQFIANFTKGNESYADYSQE
AIFYSSTVNPATRFVNALIYAMIVGFGAARIINGSSFTVGQLVTFLNYVNQYTKPFNDIS
SVMAELQSALACAERLYTILDEKELVEIGKEELTSETVFGAIHFEHICFGYEKNKPLIHD
LNMTIPAGSKVAIVGPTGAGKSTLINLLMRFYNVDAGKIKLDDRDITNYTRMSFRQQFGM
VLQETWLKKTTIHNNIAFGRPEASREEVIAAAKAANAHFFIQQLPNGYDTYLADAGDSLS
QGQRQLLTIARVFLAVPKILILDEATSSIDTRTEVLIQKAFNKLMVGRTSFIIAHRLSTI
QNADIILVLVDGDIVEHGSHQDLMQAKGMYYQMQTVQGSLAI
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atgaaaactagatattctacaagtaggttgaagcgtctagcgaatgatttattacaacaa
cgttggctttttctgttagccacggttggaacgattgttcaagttgttttgacaatttat
ttgccgattttgattggcgaggctattgatagtgttttatttcctgatgctggtcgatat
ttgcttccaattctttcaaaaatggggattgtaattgttgccaatacagtagttcaatgg
ctcaatcctttaatctataatcagttgatttatagttatagtcagcaactttgtaatgct
gtcattcaaaaaattcatcatcttcccttggcttatcttgatcgtcaaggaagtggtgat
ttagtgagtcgcttaacaacggatgtggagcagttaaataatgggttgctcatggttttt
aatcaattttttgtaggtgtactgactattcttgtaacaattgtgacaatggcaaagatt
gactttttcatgatggcattggtcttgctattaactcccttatctatgctgattgcagat
tttatcgctcgtaaaagctacaagttgtttcaaaaacagacaacagctcgggggcttcag
acacaatttatcgaagaaagtctctctcaggaaagtttgattcaaagttttaatgctcag
gagcagttcattgcgaactttacaaaggggaatgaaagctatgcggattattctcaggaa
gcgattttctattcctcgactgtcaacccagcaacgcgttttgtaaatgctcttatctat
gcgatgattgtaggatttggtgcagctcgtatcatcaatggttccagttttacagttgga
caattagtaactttcttaaattatgtgaaccaatatactaaaccatttaacgacatttcg
tctgtcatggccgaattacaaagcgcccttgcttgtgcagaacgcttgtacacgatttta
gatgaaaaggaacttgtagaaattggaaaagaagaacttacgagtgagactgtctttgga
gctattcattttgaacatatatgttttggttatgaaaaaaacaagcccttgattcatgat
ttaaatatgaccattcctgcgggaagcaaagttgctattgttgggccaactggcgcagga
aagtctaccttgatcaatcttctgatgcgcttttataatgtggatgcgggcaagataaag
ctagacgatcgagatattacaaattatactcgaatgtccttccgccagcagtttggcatg
gtgttacaagaaacgtggctgaaaaagactacaattcataataatattgcttttgggcga
ccagaagcgagtcgagaagaagtgatagcagctgctaaagcagcgaatgcacattttttt
attcagcaattaccgaatggttatgacacttatctagcggacgcaggtgactctttatca
caaggacaacggcagttattgacgattgcgcgtgtttttctagctgtacctaaaatatta
attttagacgaagcaacttcatccattgatacacggaccgaagtgcttattcaaaaagct
tttaataagctaatggtaggaagaaccagttttatcattgctcatcgtctgtctactatt
caaaatgcagatatcatcttggttttggttgatggtgatattgtcgaacatggcagtcat
caggacttgatgcaagcgaaaggtatgtattatcaaatgcagacagtgcagggaagtttg
gctatttaa
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integrated database retrieval system
