Streptococcus intermedius JTH08: SCIM_0729
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Entry
SCIM_0729 CDS
T02156
Name
(GenBank) conserved hypothetical protein
KO
K06958
RNase adapter protein RapZ
Organism
sie
Streptococcus intermedius JTH08
Brite
KEGG Orthology (KO) [BR:
sie00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sie03019
]
SCIM_0729
Messenger RNA biogenesis [BR:
sie03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
SCIM_0729
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RapZ-like_N
PapZ_C
AAA_22
AAA_16
AAA_18
NAD_binding_6
Motif
Other DBs
NCBI-ProteinID:
BAM23383
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Position
847879..848769
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AA seq
296 aa
AA seq
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MSDKKIHLVIVTGMSGAGKTVAIQSFEDLGFFTIDNMPPTLLPKFLQLIETTQDNDKIAM
VVDMRSRSFFSEIQKVLDEIENNDGLDFKILFLDAADTELVARYKETRRSHPLAADGRVL
DGIKLERALLAPLKNMSQNVVDTTKLTPRELRKTISEHFLDPAKLQSFRIEVVSFGFKYG
IPLDADLVFDVRFLPNPYYQPELRHQTGLDKPVYDYVMNHTESEEFYQHLVDLIKPILPG
YQKEGKSVLTIAVGCTGGQHRSVAFAQRLADDLTNDWTVHSSHRDKDRRKETVNRS
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atgtcagataaaaagattcatttggtcattgtaacgggaatgagtggggctggaaagact
gtagcgatccaatcttttgaagatttgggcttttttacaattgataatatgcctccaacg
cttcttcctaaatttttgcaactgattgaaaccacacaagataatgataagattgcaatg
gttgtagacatgcgtagtcgatccttcttttctgaaattcagaaagttttagatgaaatc
gaaaataatgatggacttgattttaaaattttgtttttggatgctgcagatacagaattg
gttgctcgttacaaggaaacacgacgaagtcatccgttagcagcagatggtcgtgtttta
gacggaattaagttggagcgggcattacttgcaccattgaaaaatatgagtcaaaatgtg
gtagatacgacgaaattaacaccgcgtgagttgcgtaaaaccatttctgagcattttcta
gatccagcgaaactccaatcgtttcgtatagaggtggtaagttttggttttaaatatggt
atccctttggatgcagatcttgtttttgatgttcgttttttgccaaatccttattatcaa
ccagaacttcgtcatcagacagggcttgacaaaccagtttatgattatgtgatgaatcat
acagagtcagaagaattttatcaacacttagtagatcttataaagcctattttaccaggc
taccaaaaagaaggaaaatcggttttaacaattgctgtaggttgtacaggtggtcagcat
agaagtgtagcttttgctcaacgtttagccgatgatttgacgaatgattggactgttcat
tcgtcacatcgagataaagatcgcagaaaggaaacggtaaatcgttcatga
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