Streptococcus intermedius JTH08: SCIM_0830
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Entry
SCIM_0830 CDS
T02156
Symbol
gyrA
Name
(GenBank) DNA gyrase A subunit
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
sie
Streptococcus intermedius JTH08
Brite
KEGG Orthology (KO) [BR:
sie00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sie03032
]
SCIM_0830 (gyrA)
03400 DNA repair and recombination proteins [BR:
sie03400
]
SCIM_0830 (gyrA)
Enzymes [BR:
sie01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
SCIM_0830 (gyrA)
DNA replication proteins [BR:
sie03032
]
Prokaryotic type
DNA Topoisomerases
SCIM_0830 (gyrA)
DNA repair and recombination proteins [BR:
sie03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
SCIM_0830 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Retrotran_gag_2
Motif
Other DBs
NCBI-ProteinID:
BAM23484
LinkDB
All DBs
Position
957493..959940
Genome browser
AA seq
815 aa
AA seq
DB search
MQDNNLVNVNLTSEMKTSFIDYAMSVIVARALPDVRDGLKPVHRRILYGMNELGVTPDKP
HKKSARITGDVMGKYHPHGDSSIYEAMVRMAQWWSYRHMLVDGHGNFGSMDGDGPAAQRY
TEARMSKISLEMLRDINKNTVDFADNYDSSEREPLVLPSRFPNLLVNGATGIAVGMATNI
PPHNLGETIDAVKLIMDNPDVTTRDLMEVLPGPDFPTGALVMGRSGIHRAYETGKGSIVL
RARTEIEETKSGRERIVITEFPYMVNKTKVHEHIVRLVQEKRIDGITAVRDESNREGVRF
IIEVKRDASAHVILNNLFKLTQMQTNFSFNMLAIQNGVPKILSLREILLAYIEHQKEVVT
RRTVFDKEKAEARAHILAGLLIALDHIDEVIRIIRNSETDAEAQAELMSRYELSERQSQA
ILDMRLRRLTGLERDKIQSEYDDLMKLIADLMDILAKPERVATIIKEELEEIKRKFSDER
RTELMVGEVLSLEDEDLIEETNVLITLSNKGYIKRLNQDEFTAQRRGGRGIQGTGVKDDD
FVRELVSTSTHDRLLFFTNKGRVYRLKGYEIPEYGRTAKGLPIVNLLKLDEGETIQTIIN
VQAEHDTHSYLFFTTRHGVVKRTSVTEFANIRQNGLKALNLKEEDELINVFLTNGQADII
IGTKMGYAVRFNENQVRNMGRSATGVRGVNLRTDDHVVGASVISDNQEVLVITEKGYGKR
TLASEYATKGRGGKGMKTANITEKNGPLAGLMAVNGDEDLMIITNTGVIIRTNVANISQT
GRATLGVKVMRLDKGAQIVTFTSVTADNEKEEDED
NT seq
2448 nt
NT seq
+upstream
nt +downstream
nt
atgcaggataataatttagtcaatgtgaacttaacgagcgaaatgaagacgagttttatc
gattacgccatgagtgtcattgtggctcgtgcccttcctgatgttcgagatggtttaaag
cctgtccatcgaagaatattgtatggaatgaatgaactaggtgtaacccctgataaacca
cataagaaatctgctcgtatcacgggtgatgttatggggaaatatcacccacatggagat
tcctctatttatgaagctatggtgcggatggcacaatggtggtcttatcgtcacatgtta
gtagatggtcacgggaactttggttctatggatggggacggccctgccgcgcaacggtac
acagaagctcgtatgagtaaaatttcccttgaaatgttgcgcgacattaataaaaataca
gttgattttgcagataactatgatagtagtgagcgtgaaccattagtcttaccgtcgcgt
tttcctaatttgctggtcaatggagcaactggtattgctgtggggatggctaccaatatt
cctcctcacaatcttggtgaaactattgatgccgttaaattgatcatggacaatccagat
gtaacaacgcgcgatcttatggaagtattacctggaccagattttccaacaggtgcttta
gtaatgggaaggtcaggtattcatcgtgcttatgaaactggtaaggggtccattgtttta
cgtgctcgaacagaaatcgaagaaactaaatctggacgtgaacgaattgttatcactgaa
tttccgtatatggtcaacaagacaaaagttcatgaacatattgtccggctggttcaagaa
aaacggatcgatggaattacggcagtccgtgatgaatctaatcgagaaggagtgcgcttc
atcattgaagtaaagcgtgatgcaagtgcgcatgtgatcttgaacaacttgttcaaatta
acgcaaatgcaaacaaatttcagtttcaatatgttagcaattcaaaacggagtgcctaaa
attttgtctcttcgtgaaattttactagcttatattgaacatcaaaaagaagtggtaaca
cgtcggacggtttttgataaggaaaaggccgaagctcgtgctcatattttagcaggtttg
ttaattgcgcttgatcatattgatgaagtcattcgcattattcgaaatagtgaaaccgat
gctgaagcacaagcggaattaatgtcacgttatgagttatctgaacgtcaaagtcaagca
attctggatatgcgtcttcgtcgtttgacaggattggagcgcgataagatccagtctgaa
tatgatgacttaatgaaattaattgcagatttgatggatattttggcaaaaccggaacga
gtagctaccattatcaaggaagaattagaagagattaaacgtaagttctctgatgaacgc
cgcacggaattaatggttggtgaagtattatctctagaagacgaagatctcatcgaagaa
actaatgttttaatcactctttccaataaaggttatattaaacggctgaatcaggatgaa
tttactgcacaaagacgtgggggccgtggtattcaaggaacaggtgtgaaagatgatgat
tttgttcgtgaattagtctctaccagcacacacgatcgcttactcttctttaccaataaa
gggcgtgtttatcgtttgaaaggttatgaaattcctgaatatggtcgtacagctaaagga
ttgccaattgtcaacttattgaaattggacgaaggtgaaacgattcagacaatcatcaat
gttcaagctgaacacgatactcattcttaccttttcttcactacacgccatggtgtggta
aaacgaactagcgtaacggaatttgctaatattcgtcaaaatgggttaaaagctctgaat
ttaaaagaagaagatgagttgattaacgtctttttgacaaatggacaagcggatatcatt
atcggaacaaaaatgggctacgctgtacgttttaacgaaaaccaagttcggaatatggga
cgtagtgcgactggtgtgagaggagtaaatttgcgtacggatgaccatgttgtaggcgct
agtgtcatttcagataatcaagaagtattagttattactgaaaaaggttatggtaagcga
actttagccagtgagtatgctacgaaaggtcgtggcggaaaaggaatgaaaacagctaat
attactgagaaaaatggtccattagcaggcttgatggccgtgaatggtgatgaagatttg
atgattatcacgaatacaggggtcatcattcgaacgaatgttgctaatatttctcagaca
ggccgtgcgactttaggtgttaaagtaatgcggctcgataaaggagcacagattgttacc
tttacaagcgttacagcggataatgaaaaagaagaggatgaagattaa
DBGET
integrated database retrieval system
