Streptococcus intermedius JTH08: SCIM_0884
Help
Entry
SCIM_0884 CDS
T02156
Name
(GenBank) ABC transporter
KO
K18890
ATP-binding cassette, subfamily B, multidrug efflux pump
Organism
sie
Streptococcus intermedius JTH08
Pathway
sie02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
sie00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
SCIM_0884
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sie02000
]
SCIM_0884
Transporters [BR:
sie02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
SCIM_0884
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_22
AAA_16
RsgA_GTPase
AAA_29
AAA_10
MMR_HSR1
Dynamin_N
DUF87
AAA_7
SbcC_Walker_B
Motif
Other DBs
NCBI-ProteinID:
BAM23538
LinkDB
All DBs
Position
complement(1017281..1019023)
Genome browser
AA seq
580 aa
AA seq
DB search
MRKQVTFYRLLTYMWRYKWISILALVFIFATTLVTTTLPLLARYFIDHFISRYQIMTGFY
VLIMYYALFLLRVLFTFLGQYSFARVAHSIVRDLRQESFENIEYLGMVYFDQTPAGAIVS
RLTNDTQAVADMFSSIFSSFLSSVFILVVTLVTMFSLNWQLTGLIVLFLPVMLGSILVYQ
RLSDRLLKLVRSKLSDLNVKLSESIEGMRIIQAFGQENRLIKEFETINGEHLDYTVRYLN
INSLFLRPAMSLLKILAYAVILAYFGFTWQIAGVTAGVMYAFVQYVNQLFNPLIDLMQNY
SVLQTSMVAAGRVFEIMDRKDYEPKQTNLPLEITDGKIEFRHVSFSYDGKYDILRDISFS
VKQGETIAFVGATGSGKSSIINLFLRFYEFERGEILIDDKNIKDYSQSELRRNIGLVLQE
PFLYHGTIASNIKMYQENLGREEIVEAAKFVDAHDFISRLPANYNSPVTERGATFSSGQR
QLLAFARTIASKPKILILDEATANIDSETEELIQSSLRKMRQGRTTIAIAHRLSTIQDAN
CIYVMEKGRIIESGTHEELLTLKGTYYKMYQLQAGMMGEE
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atgagaaaacaagtaaccttttatcgccttctaacttatatgtggcgttataaatggatt
agcattttggcactcgttttcatctttgcgacaaccttggtaacgacaactttgccactt
ttagctcgctatttcattgaccattttattagtcgttatcagattatgacaggtttttat
gttctgattatgtactatgctctttttcttttgcgagtgttatttactttcttgggacaa
tattcttttgcgcgtgtggcacatagcattgttcgcgatttgcgtcaagaaagttttgaa
aatattgagtatttagggatggtctattttgatcagaccccagcaggagcgattgtctcc
cgtttgacaaatgatacacaagcagtagcggatatgtttagtagtatcttttcaagtttt
ttaagctctgtttttattcttgtcgtaacattggtgacgatgtttagcttgaattggcaa
ttgacaggtcttattgtactctttttaccagtcatgttaggttccattttggtttatcaa
cgcttatctgatcgtctcctcaagcttgtcagaagtaaacttagcgatttgaatgttaag
ctttctgaaagtattgagggaatgcgtattattcaggcatttggtcaagaaaatcgctta
ataaaggaatttgaaactattaacggtgagcatttggattatacagttcgctatcttaat
attaatagcctttttctgcggccagccatgtctttgttgaaaattttagcttatgcggtc
attttagcttattttggttttacttggcaaattgcaggagtaacagccggagttatgtat
gcctttgtccaatatgtcaatcagctttttaatcctttgattgatttgatgcagaattat
tctgttttgcaaacatctatggtagctgcaggccgcgtttttgaaatcatggaccgtaag
gattatgaaccgaagcaaaccaatttaccgctagagattacagatggaaagattgaattt
cgtcatgtttctttttcttatgatggcaagtatgatattcttagggatatctcattttcg
gtcaaacagggggagacaattgcttttgtcggtgcgactgggtcgggcaagtcctctatc
attaatctctttttacgtttttatgagtttgagagaggtgaaattttaattgatgataaa
aatattaaagattacagtcaatctgaattgcgccgaaatattggcttagttcttcaagaa
ccgtttctttatcatggtaccattgcttctaatattaaaatgtatcaagaaaatctaggg
agagaagagattgtagaagctgctaaatttgttgatgcgcatgactttatcagtcggcta
cctgcaaactataatagcccagtgacagagagaggagcgactttttcgagtggtcaaaga
caattgctagctttcgctagaacaattgcaagcaaacctaaaatcttaattttggatgaa
gcaaccgccaatattgattcagaaaccgaagaactgattcaatcttctttgagaaaaatg
cgtcaaggacgaacgactattgccatcgctcaccggctatctaccattcaagatgccaat
tgtatttatgttatggagaaaggccgaattattgaatctggtactcacgaagaactctta
actctcaaaggtacttattataaaatgtaccaacttcaagcaggtatgatgggagaggag
tga
DBGET
integrated database retrieval system
