Streptococcus intermedius JTH08: SCIM_0885
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Entry
SCIM_0885 CDS
T02156
Name
(GenBank) ABC transporter
KO
K18889
ATP-binding cassette, subfamily B, multidrug efflux pump
Organism
sie
Streptococcus intermedius JTH08
Pathway
sie02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
sie00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
SCIM_0885
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sie02000
]
SCIM_0885
Transporters [BR:
sie02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
SCIM_0885
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
Zeta_toxin
RsgA_GTPase
SMC_N
nSTAND3
AAA_22
AAA_16
AAA_23
DUF87
cobW
ATP-synt_ab
AAA_14
MobB
TsaE
AAA_29
AAA_18
NACHT
NB-ARC
DO-GTPase2
TrwB_AAD_bind
Septin
MMR_HSR1
AAA_33
Motif
Other DBs
NCBI-ProteinID:
BAM23539
LinkDB
All DBs
Position
complement(1019023..1020765)
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AA seq
580 aa
AA seq
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MNLIRKLGWFFNLERKRYIIGILALSLVSVFNLIPPRVIGVVIDRIASRNLTSNQLVLNL
SVLLASAFIMYALRYLWRLYIFGTANHLGRILRSRLFEHFTKMSPSFYQKYRTGDLMAHA
TNDINAVVSVAGGGVMSAVDATITALVTLLTMFFVLDWRLTLIATLPLPFLSWGTSLIGR
KNHESFKAAQEAFSDLNNKVQESVSGIKVTKSFGYQIAESQSFAKINQGVYEKNILAAKY
NSLFDPMVLIFIGLSYALTLIFGGLFISRGQFTVGELVTFITYLDMLVWPLQAMGYLFNI
SQRGAVSYERIERLLAEKSDVKETKSPVSPIQNGRLVYDIKRFSYEETATLSNIHFSLEK
GQTLGIVGQTGSGKTTLLRLLMREQDIQEGAICLNNHDIRDYTLNDLRSLIGYVPQEQVL
FAMSIADNIRFANPNLSDDEVIQASKLCGLYEDIIGMPAGFHTIVGERGVSLSGGQKQRL
AMSRALVLKPDILILDDSLSAVDAKTEHLILENLKTERDDKTTIITAHRLSAIVHADLIL
VMENGRIKERGTHQELLTQNGWYAQTYHKQQLAENLKEDR
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttatcagaaaattaggttggtttttcaatctagaaagaaagcggtatataatt
ggaattctagccttgtctttggttagtgtttttaatttaatcccccctagagtaattggt
gtggtaattgaccgtattgctagtcgaaatctaacatcaaaccaattagttttaaatctt
tcggttttgcttgcttcggcttttattatgtatgctcttcgttatctttggcgtctctac
atttttggcacagcaaatcatttggggcgaattttgcgctctcgtctctttgaacatttt
actaaaatgtctccgtctttttatcaaaaatatcgaacaggagatttgatggcgcatgca
acaaatgatattaatgcagtcgtgagcgtggcaggtggaggcgttatgtcggcagtagat
gccacaatcacagctctggtaacgctgttgactatgttttttgttttagactggcgcctg
actttgattgccaccttaccattgccatttctttcttggggaacgagtctaattgggcga
aaaaatcatgagagttttaaggcagcccaagaagctttttctgatttgaacaataaggtg
caggaaagtgtttcggggattaaagtgactaaatcatttggctatcaaatagcagaaagt
caatcttttgcaaaaataaatcagggtgtctatgagaaaaatattttagccgcaaaatat
aattccctatttgaccctatggtgttgattttcatcggcttatcttatgctttaaccttg
atttttggtggactgttcatctctagaggacaatttacagttggagaattagtaacattt
atcacttatctggatatgttagtgtggcctttgcaggcaatgggttatctttttaatatt
agccagaggggggcagtttcttatgagcggattgagcgactgttagcagaaaaatctgat
gtcaaagagacaaaaagccctgtttcccctatccaaaacggtcgcttagtctatgatatt
aaacgtttttcttatgaggaaacagcaactttgtccaatattcacttttcgttagaaaaa
gggcaaacgttaggaatcgtaggacaaacaggttctggcaagacgacgcttttgcgcttg
cttatgagagaacaggatattcaggaaggtgctatttgtctgaataatcatgacattcga
gattatactttaaatgatttacggagcttaattggctatgtgccgcaggagcaggttctt
tttgcaatgtcaattgcggacaatattcgttttgcaaatccaaatttgtcagatgacgaa
gtgattcaagctagtaaactttgtggtctttatgaggatattattggcatgccagcaggc
tttcatacgattgtcggtgaacgtggggtgtcgctttcaggaggtcaaaagcaacgttta
gcaatgagtcgagcacttgttcttaaaccagatattttaatattggacgactctttatct
gctgttgatgctaaaacagagcatttgattttggaaaacctcaaaacagaaagagacgat
aaaacaaccattatcactgcgcaccgtctatcagcaattgttcatgcagatttgatttta
gtgatggaaaatggacgaattaaagaacggggtactcaccaagagttattaactcaaaat
ggttggtatgcacaaacttatcataaacaacaattggcagaaaatctaaaggaggatcga
taa
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