Streptococcus intermedius JTH08: SCIM_0909
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Entry
SCIM_0909 CDS
T02156
Symbol
ung
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
sie
Streptococcus intermedius JTH08
Pathway
sie03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sie00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SCIM_0909 (ung)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sie03400
]
SCIM_0909 (ung)
Enzymes [BR:
sie01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
SCIM_0909 (ung)
DNA repair and recombination proteins [BR:
sie03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
SCIM_0909 (ung)
Prokaryotic type
SCIM_0909 (ung)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
BAM23563
LinkDB
All DBs
Position
complement(1044289..1044966)
Genome browser
AA seq
225 aa
AA seq
DB search
MSIEEEKTMEHSAWHSLIKQQLPDGYFGKINYFLNQVYSSGTIYPPREKVFNAIQTTDLV
DVKVVILGQDPYHGPRQAQGLSFSVPDDIPAPPSLQNILKELADDIGMKESHDLTSWARQ
GVLLLNASLTVPAGQANGHAGQIWEPFTDAVIKVVNEKDTSVVFILWGSYARKKKALITN
PKHLVLESPHPSPLSAHRGFFGSKPFSKTNAFLTSQGIEPINWLV
NT seq
678 nt
NT seq
+upstream
nt +downstream
nt
ttgagtatagaagaggagaaaacaatggaacactcagcttggcatagtttgattaagcaa
caattacctgatggttattttggtaaaattaattattttttaaatcaggtttattcatca
ggcacgatctatccgccgcgtgaaaaagtatttaatgcgatacaaacgactgatttagta
gatgtaaaggtggtaattttaggacaagatccttatcatggtccgcgtcaagcgcagggg
ttgagcttttcagtaccagatgatattccagcgccgccctctcttcaaaatattttgaaa
gaattggcagatgatatcggcatgaaagaatctcatgatttgacatcttgggcgcgtcaa
ggagtactgttgctaaatgcgagtttgactgttcctgctgggcaagcaaatgggcatgct
ggtcaaatttgggaaccgtttacggatgccgttattaaggttgtcaatgaaaaagataca
tctgttgtttttattctctggggttcctatgcacgcaagaaaaaagcattgattaccaat
ccaaaacatctcgttttggaatctcctcatccgagtcctttatcggctcatagaggtttt
tttggaagcaaacctttttctaagacaaatgcctttctgacatctcaagggatagaaccg
ataaattggttggtataa
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