Streptococcus intermedius JTH08: SCIM_0951
Help
Entry
SCIM_0951 CDS
T02156
Symbol
birA1
Name
(GenBank) biotin-(acetyl-CoA-carboxylase) ligase
KO
K03524
BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:
6.3.4.15
]
Organism
sie
Streptococcus intermedius JTH08
Pathway
sie00780
Biotin metabolism
sie01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sie00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00780 Biotin metabolism
SCIM_0951 (birA1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sie03000
]
SCIM_0951 (birA1)
Enzymes [BR:
sie01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.4 Other carbon-nitrogen ligases
6.3.4.15 biotin---[biotin carboxyl-carrier protein] ligase
SCIM_0951 (birA1)
Transcription factors [BR:
sie03000
]
Prokaryotic type
Helix-turn-helix
Other families
SCIM_0951 (birA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BPL_LplA_LipB
HTH_11
BPL_C
HTH_24
GntR
Fe_dep_repress
HTH_36
HTH_23
MarR
Rio2_N
Mga
TrmB
HTH_10
HTH_Crp_2
HTH_1
HTH_AsnC-type
KORA
MarR_2
Rrf2
HTH_29
HTH_8
HTH_41
HTH_50
HTH_28
HTH_CodY
HTH_psq
NirdL-like_HTH
EAP30
Motif
Other DBs
NCBI-ProteinID:
BAM23605
LinkDB
All DBs
Position
1090132..1091067
Genome browser
AA seq
311 aa
AA seq
DB search
MKTYEILFDILSKESDYVSGEKLAQKLGISRTSIWKAIQRLEKEGIHIESIKNKGYKLIS
GDLLITKKIEEAAPIQVSFNPNCKSTQLDAKAGIEAGKPANTLYLASSQTAGRGRFGRSY
FAPEQGGIYMTLHLKPNLPFPQIPAYTVLTAGAIYKAIKELTLMEMEIKWVNDIYYKGKK
IAGILTEAITSIETGLVTDVIIGVGINFAIADFPKELQHKAASLFHKKHPITRNELISEI
WKNFYECDPDELIYLYKQHSLVLGRTITFYQNDQDYKGIAKEISDHGQLLVQLDTGQEMW
LNSGEISLTSW
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacatatgaaattttatttgatattcttagcaaagagtctgactatgtcagtggt
gaaaaattagcacaaaagttaggtatttcacgtacttctatctggaaagctattcagcgc
ttggaaaaagaagggattcacattgaatccataaaaaataaaggttataaactcatctct
ggtgacttgctgattactaaaaaaatagaagaagccgctcccatccaagtttccttcaat
ccaaactgcaaatccactcagttggatgccaaagctggtattgaggctggtaagcctgca
aatacgctctatcttgcttcttctcagacagctggtcgtggacgctttggcagaagttat
tttgctccagaacaaggaggaatttatatgacgcttcacttgaagcccaatctgcctttt
ccacaaattcccgcctacactgtcttgactgctggagccatttacaaggccatcaaagag
ctcactttaatggagatggaaattaaatgggtgaatgacatttattacaaaggtaaaaaa
atagctggtattttaactgaagctattacttctattgagacggggctggtaacggatgta
attattggagtaggcatcaactttgccattgctgattttccaaaagaattacagcataag
gctgcctctctcttccataaaaaacatcctatcacgcgaaatgaacttattagtgagatt
tggaaaaatttttatgaatgtgacccagatgagctgatttatctttacaaacagcattcc
cttgtcttgggtcggacaatcactttttaccagaacgatcaagactataaaggaattgcc
aaagaaatatcagatcatggccaactattagttcaattagatacaggccaagaaatgtgg
ctaaatagtggtgaaatttctttaacaagttggtaa
DBGET
integrated database retrieval system
