Streptococcus intermedius JTH08: SCIM_1002
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Entry
SCIM_1002 CDS
T02156
Symbol
uup
Name
(GenBank) ABC-NBD transporters with duplicated ATPase domains
KO
K06158
ATP-binding cassette, subfamily F, member 3
Organism
sie
Streptococcus intermedius JTH08
Brite
KEGG Orthology (KO) [BR:
sie00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
sie03012
]
SCIM_1002 (uup)
Translation factors [BR:
sie03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
SCIM_1002 (uup)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_tran_Xtn
AAA_21
SMC_N
AAA_29
RsgA_GTPase
ABC_tran_CTD
AAA_22
MMR_HSR1
NACHT
AAA_24
NB-ARC
AAA_14
Dynamin_N
AAA_15
nSTAND3
AAA_33
TsaE
AAA_18
AAA_16
AAA_28
MobB
DUF5906
AAA
Septin
AAA_23
ORC-CDC6-like
YobI-ATPase
ATPase_2
FtsK_SpoIIIE
MipZ
nSTAND1
DO-GTPase2
DUF4407
FapA
Motif
Other DBs
NCBI-ProteinID:
BAM23656
LinkDB
All DBs
Position
complement(1144258..1146153)
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AA seq
631 aa
AA seq
DB search
MIILQASKIERSFAGELLFNNINLQVDEGDRIALVGKNGAGKSTLLKILVGEEEPTSGQI
NKKRDLSLSYLAQDSRFESENTIYDEMLLVFDSLRQQEKRLRQMELQMGELSGEDLTALM
TQYDQLSEGFRQKGGFTYEADIRAILNGFKFDQSMWQMKISELSGGQNTRLALAKMLLEK
PELLVLDEPTNHLDIETIAWLETYLINYSGALIIVSHDRYFLDKVATITLDLTKHSLDRY
VGNYSSFVVQKEQKLATEAKNYEKQQKEIAALEDFVNRNLVRASTTKRAQSRRKQLEKME
RLDRPETGSRSANMTFKSDKVSGNVVLTLEDAAIGYGKEVLSEPINLDIRKFNAVAIVGP
NGIGKTTLIKSLIGQVPFIRGKEQLGANVEVGYYDQTQSKLTPSNTVLDELWNDFKLTPE
VEIRNRLGAFLFSGDDVKKSVGMLSGGERARLLLAKLSMENNNFLILDEPTNHLDIDSKE
VLENALIDFDGTLLFVSHDRYFINRVATQIIELSETGSTLYLGDYDYYLEKKAEQEALCE
EAEQVSPDKPAPANNYQLQKENQKEQRRLARRLEQLEAQIEDLDSQISQLQEAMQATNDA
GELMESQQQIDQLTDAQEEVLLEWEELADKV
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atgattattttacaagcaagcaagattgagcgctcttttgcaggtgagcttctttttaac
aatattaacctgcaggtggatgagggtgatcgaattgccctcgtcggtaaaaatggagct
ggaaagtcaaccctgctcaagattttggtgggcgaggaagagcctacttctggtcagatc
aataaaaaacgagacctgtccctgtcctatctggctcaggacagccgctttgagtcggag
aataccatctacgacgagatgctgctggtctttgatagtctgcgtcagcaagagaagcgt
ttgcggcagatggagctgcaaatgggagaattgtcaggggaagacctgactgctctcatg
acccagtacgaccagctgtcagagggctttcgccagaaaggtggttttacctacgaggcc
gatattcgagctattttgaatggtttcaagtttgaccagtccatgtggcagatgaagatt
tctgagctttcgggcgggcagaatacccgtctggctctggctaagatgcttttggaaaag
ccagaactgctggtactggacgagccgaccaaccacttggatatcgagactattgcctgg
ctggagacttacttgattaactacagcggtgcattgattatcgtcagtcacgaccgttat
ttcctggacaaggttgcaactatcacgctggatttgaccaaacattccttggatcgttat
gtgggcaattattctagcttcgtggtccaaaaggagcagaagttagccactgaagctaag
aattacgaaaagcaacagaaagaaattgctgcgctagaggactttgtcaatcgcaatcta
gtccgagcctccactaccaagagggctcagtcccgccgcaaacagctggaaaagatggag
cgtttggacaggccggagactggcagccgctcggctaatatgaccttcaaatccgataag
gtttctggaaatgttgttctgactttggaagacgcagctattggctacggaaaggaagtc
ctgtcagagccgattaaccttgatattcgcaagtttaatgcggtagctattgtcgggcca
aatgggattggaaagactaccttgattaaatcactaatcggtcaagtgcccttcatcaga
ggtaaggagcagttgggggctaatgtggaagtaggctactatgaccagacccagagcaaa
ctgactcccagcaatacggttctcgatgagctatggaatgacttcaagctgacgccagag
gtcgagattcgcaatcgcttaggcgctttcctcttctcgggagacgatgtcaagaagtct
gtcggcatgctatcaggtggagagcgggcgcggctgcttctagccaagctgtctatggaa
aacaacaactttctcatcctagacgagccgactaaccacctggacattgatagcaaggaa
gtgctggaaaatgccctgattgactttgacggcaccctgctctttgtcagccatgatcgt
tactttatcaaccgtgtggccacccagattattgagctctctgagacaggctccaccctt
tatctgggtgattatgactactatctggaaaaaaaggcagagcaggaagccttgtgtgag
gaggcggagcaggtcagtcctgacaagccagcacctgccaataactatcagcttcaaaag
gaaaaccagaaagaacagcgccggctggcccgccgcctagagcagctggaagcgcaaatc
gaggacttggacagtcagatcagtcagcttcaggaagccatgcaggcaaccaacgacgcc
ggcgaactcatggagagccagcagcaaatcgaccagctgaccgatgcccaagaagaagtc
ctgctagaatgggaagaactggcggataaggtgtag
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