Streptococcus intermedius JTH08: SCIM_1016
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Entry
SCIM_1016 CDS
T02156
Symbol
tex
Name
(GenBank) transcriptional accessory ribonuclease
KO
K06959
protein Tex
Organism
sie
Streptococcus intermedius JTH08
Brite
KEGG Orthology (KO) [BR:
sie00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99973 Transcription
SCIM_1016 (tex)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Tex_N
Tex_YqgF
HHH_3
HHH_9
S1
YqgF
HHH_7
AhpC-TSA_2
T2SSK
ATP-synt_ab_C
Sigma70_r3
DUF2316
Motif
Other DBs
NCBI-ProteinID:
BAM23670
LinkDB
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Position
complement(1157612..1159765)
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AA seq
717 aa
AA seq
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MEYGIILFMETNIIEIAQSLNVSQKQVEKVLELTAEGNTIPFIARYRKEMTGNLDEVEIK
AILDLDKSLTNLKERKETVLAKIEEQGKLTDKLRAAIEAAEKLTDVEELYLPYKEKRRTK
ATIARAAGLFPLARLILQNVSNLQEEAIGLTSEAFPTAEAALSGAVDILVEAISEDVQLR
AWTYHEILKNSSIVSTLKDANLDEKQVFQIYYDFSEKIADMQGYRTLALNRGEKLGVLKV
GFEHNVEKIIRFFELRFKIKNNYIHEAIQQAVKKKIIPAMERRIRTELTETAEDGAIQLF
SDNLRHLLLIAPLKGRVVLGFDPAFRTGAKLAVVDATGKMLTTQVIYPVPPAKAAQIEAS
KQELSDLIEQFGVEIIAIGNGTASRESEAFVAEVLKTHPNVSYVIVNESGASVYSASELA
RHEFPDLTVEKRSAISIARRLQDPLAELVKIDPKSIGVGQYQHDVSQKKLSESLDFVVDT
VVNQVGVNINTASPSLLSHVAGLNKTISENIVKYREEEGMIHSREDIKKVPRLGAKAFEQ
AAGFLRIPESDNILDNTGVHPESYPAVEKLFQMLAVKDLNQDGQEKLQSLDVAKVVNDLG
IGEATLKDIIADLLKPGRDLRDSFDAPVLRQDVLDIKDLQIGQKLEGVVRNVVDFGAFVD
IGIHEDGLIHISKLSNNYVKHPSQIVSVGDLVTVWVDKLDIEREKVNLSLVSPHESN
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
ttggaatatggtataatactttttatggaaacaaatattattgaaatcgcacaaagttta
aatgttagtcaaaaacaagttgaaaaagttcttgaattgacagctgaaggcaatacaatt
ccctttatcgctcgttatcggaaagaaatgacggggaatttggatgaggtagagatcaaa
gcaattcttgatttggataaaagcctgacaaatctcaaagaacgtaaagaaacagtgtta
gctaagatcgaggagcaaggaaagctgacggataaattacgtgcagctattgaagcagct
gaaaagttgactgatgtggaagaactttatcttccttacaaagaaaaacgtcggacaaag
gctacgattgcgcgtgcagcaggactttttcccttggcacggcttatattgcaaaatgtt
agcaatctacaagaagaagccattggtttaactagtgaagcatttccaacggcagaagcg
gctctatctggagctgtagatattttggtggaagccatttcagaagatgtccaactgcgt
gcatggacctatcatgaaatactgaaaaattcaagcattgtttcaactttgaaagatgca
aatttggacgaaaagcaagtatttcaaatttattatgatttttctgaaaaaattgcggat
atgcaaggttatcggactttagctttaaatcggggtgaaaagctaggtgttcttaaagtt
ggctttgaacataatgtagaaaaaatcattcgcttttttgagttgcggtttaagattaaa
aataactacattcatgaagcaatccaacaagcagtgaaaaagaaaatcattccagctatg
gaacgtcgaattcgaacagaattaactgaaacagcggaagatggtgctattcagctattt
tcagacaatcttcgtcatctgctcttaattgcgccactcaaagggcgcgtagtactcggt
tttgacccagctttccggacaggagctaagctagcagtcgtagatgcaactggaaaaatg
ctgacaactcaggttatctatcctgttccgccagcaaaagcagcacaaattgaagcttct
aagcaagaactgtcagacttgattgaacaatttggcgttgaaattatcgctattggaaat
ggaacagctagtcgagaaagtgaagcgtttgttgctgaagtgctgaaaactcatcccaat
gtcagctatgtcattgtaaatgaaagcggtgcatctgtttattcagctagcgaattggcg
cggcatgaatttcctgatttgaccgttgagaaacgttcggctatctcgattgctcggcgt
ttgcaggatccgcttgcagagttggttaaaattgatccgaaatcaatcggtgttgggcaa
taccagcatgatgttagtcagaagaaattatctgaaagcttggattttgttgtagatacc
gttgtcaatcaggttggcgttaatatcaatactgcaagtccctctcttctctctcatgta
gcaggattgaacaaaacgatttctgaaaatattgtcaaatatcgtgaagaagaaggtatg
attcattcgcgtgaagatattaaaaaagtgcctcgcttgggtgctaaagcatttgaacag
gcagcaggtttcttacggattcccgaaagtgacaatattttagacaatacaggtgttcac
ccagagagttatccagctgttgagaaattattccaaatgctagcagttaaagacttgaat
caagatggtcaggaaaaattacagtcattggatgtagccaaggtagttaacgacttggga
ataggggaagcaacacttaaagacatcattgcagacttactcaagccaggtcgagattta
cgtgattcgtttgatgcaccagttcttcgtcaagatgttctagatataaaggacttacaa
attgggcaaaaattagaaggtgttgttcgcaatgttgttgattttggagcttttgtggat
attggtattcatgaagatggcttgattcatatttcgaagctcagcaacaactatgtcaaa
catccgagtcaaattgtctctgtcggtgacttggtgacagtctgggtagataaattggat
atagaaagagaaaaggtcaatctttccttggtgtcgccacatgaatctaactaa
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