Streptococcus intermedius JTH08: SCIM_1056
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Entry
SCIM_1056 CDS
T02156
Name
(GenBank) ABC-type multidrug transporter
KO
K14699
ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-]
Organism
sie
Streptococcus intermedius JTH08
Pathway
sie02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
sie00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
SCIM_1056
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sie02000
]
SCIM_1056
Transporters [BR:
sie02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
SCIM_1056
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
SMC_N
AAA_21
AAA
ATP-synt_I
ABC_ATPase
RsgA_GTPase
AAA_22
AAA_24
AAA_29
AAA_25
AAA_18
AAA_30
SbcC_Walker_B
AAA_15
AAA_17
AAA_16
NACHT
nSTAND1
G-alpha
nSTAND3
Zeta_toxin
AAA_23
TsaE
Motif
Other DBs
NCBI-ProteinID:
BAM23710
LinkDB
All DBs
Position
complement(1197986..1199731)
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AA seq
581 aa
AA seq
DB search
MLNILKKFFDFCTTEDRRKFYQSIYLGIIKSFIIALRIPAIGLVVMGLIEKNLSMQTFWL
ALGIMLASTVLNVWITLKITMLQTEAGYHTCAQKRIEIAEHMRYLPMGYFNQNSLGKITS
VTTNTLEGLSDVATRVVMMTVQGFLTTGLITMLVFLYDWRVGLVLLVGLVLFLLPNTLMR
WQVGKVSDDKYQADTDLIAVVLEYSQGIAEVKNYNLVNRSAKKLSKAIERKSQLDTKMTL
VTSPYIALQGIVTKLTGLFMGLFSIYFYLNGGMELLVTIMMIVSGFMIYENLDGVGSFSS
LLRIVDLSVDMVNQVLAIQPMDIIGQDIEPKSSRIELRDVSFSYGNKKIIDRVSLTIPEK
TTTALVGPSGSGKTTLCNLIARFWDVDHGSISLDGHDVRDYSYDSLIRNFSFVFQSVYLF
EDTIANNIRFGKPEASQEEVIEAAKKAACHDFILSLPDGYDTKIGEGGASLSGGERQRIS
IARAIIKDAPIIILDEATANVDPENEEALMQAIQALTRDKTIIMIAHRLKTVEHADQILV
LDQGRIVEQGKHQDLLAKQGIYSKFIQERKTAASWRIEMGE
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atgcttaatatactgaagaaattctttgatttctgtacaacagaggaccgtaggaaattt
tatcaatccatttatctgggtatcatcaagtcctttatcatcgctctgcgtatcccagca
atcggcctagtcgttatgggactgattgagaagaatctctctatgcagaccttctggctg
gctctgggtatcatgttggcatccactgtgctaaacgtctggattacactgaaaattacc
atgctacagacggaagcgggctatcatacctgtgctcagaagcggattgaaattgccgag
cacatgcgctatctgcccatgggttactttaatcaaaatagcttgggcaagattaccagt
gttacgaccaatacgctggaaggactgtctgatgtagctaccagagtggttatgatgact
gtgcagggctttctgacgactggcctcatcactatgttggtctttctctatgactggcgg
gttggtctggttctcttggttggtctcgtcctctttctcctgccaaatacccttatgcgt
tggcaagttggcaaggtttctgatgacaagtatcaggcggatacggacctgatagccgtt
gttttggaatatagccaagggattgcagaagtaaagaactataatctggttaaccgttct
gccaagaagctgtccaaagctattgaacgcaaaagtcagctagataccaaaatgacactc
gtgacctcaccttacattgccctccaaggcatagtgaccaagctgactggtctctttatg
gggcttttctctatctacttttatctcaatggtggtatggagctgctggtaaccattatg
atgattgtcagtggttttatgatttatgaaaatctagacggcgttggctctttctcttct
ctcctgcgcattgttgatttgtcggttgatatggtcaatcaagtcttggctatccagcct
atggacatcatcggtcaggatattgagcctaagagcagtcggattgagctgagagatgtt
agcttctcttatggaaataagaaaatcattgaccgagtttccctcaccattccagaaaaa
acgacgactgccttggtcggaccttctggatcaggcaagacaacgctctgcaatctcatt
gcccgcttctgggatgtggaccatggaagtattagtttggacgggcatgatgtcagggat
tacagctatgacagcctgattcgcaatttcagctttgtcttccaaagcgtctacctcttt
gaggataccattgccaataacattcgttttggcaagccggaggccagtcaggaagaagtg
atagaggctgccaagaaagccgcctgtcatgattttatcctctcgctacctgatggctat
gataccaagattggtgaagggggtgccagtctttctggaggtgagcgtcagcgcatttcc
atcgcgcgggctattatcaaggatgcgcctattatcattctggatgaagcaacagccaat
gttgatccagagaatgaagaagccctcatgcaggctattcaggctctgactcgcgataag
accattatcatgattgcccaccgactcaagacagttgagcatgcagaccagattttggtg
ttagatcaaggccgtattgtcgagcaaggcaaacaccaagacttacttgcaaaacaaggt
atctatagtaagtttatccaagaaagaaaaacagctgccagctggcggattgagatgggg
gagtga
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integrated database retrieval system
