Streptococcus intermedius JTH08: SCIM_1098
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Entry
SCIM_1098 CDS
T02156
Name
(GenBank) ABC transporter permease protein
KO
K18888
ATP-binding cassette, subfamily B, multidrug efflux pump
Organism
sie
Streptococcus intermedius JTH08
Pathway
sie02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
sie00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
SCIM_1098
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sie02000
]
SCIM_1098
Transporters [BR:
sie02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
SCIM_1098
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
AAA_22
AAA_21
AAA_23
AAA
RsgA_GTPase
MMR_HSR1
AAA_29
Zeta_toxin
ABC_ATPase
DO-GTPase2
AAA_14
SMC_N
AAA_16
AAA_30
TsaE
nSTAND3
Adeno_IVa2
DUF87
AAA_18
AAA_33
AAA_28
cobW
NB-ARC
AAA_15
AAA_24
Glyco_hydro_92
Motif
Other DBs
NCBI-ProteinID:
BAM23752
LinkDB
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Position
complement(1252052..1253821)
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AA seq
589 aa
AA seq
DB search
MKQHSFMRLWSYLKVYKLSVILAIFLKVVSIVMSVLEPFVLGLAITELTRNVLDIAKGVE
GASINTTYVFWVMALYLLRGLFYEIGAYYSNYFMTNAVQNTVRDMRNELSSKINQIPVSY
FDKHQFGDLLGRFTSDVETVSNALQQSFLQVVNAVLTITLVIGMVLYLNFQLALIVIASI
PLTYFGATFILKKSQPYFKKQADTLGVMNGFVQENLTGFNVLKLYGREETSSDDFREITQ
NLQEVGFKASFISGLMMPILNAISDLTYLLVAVVGGLQVISGQLTIGNMQAFVQYVWQVN
QPIQNLTQLAGQLQSAKSSLDRIFQVLDEPDEVTDIKEQLEHDLTGQVSFQHVDFQYVES
KPLIRDFNLEVKPGEMVAIVGPTGAGKTTLINLLMRFYDVTAGSISVDGHDIRNLSRQDY
RKQFGMVLQDAWLYEGTVKDNLRFGNLSATDEEIMDAAKAANVDHFIRTLPGGYNMEMNQ
ESSNISLGQKQLLTIARALLANPKILILDEATSSVDTRLELLIQKAMKNLMQGRTSFVIA
HRLSTIQEADKILVLKDGQIIEQGTHESLLADRGFYYDLYTSQFAKKEA
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atgaaacaacatagttttatgcgtttgtggagttacttaaaagtttataaactctcagta
atccttgctatctttttgaaggtggtgagtattgtgatgagcgtgctagagccttttgta
cttggtcttgctattacagaattgacacgaaatgtgctggacatagcaaaaggagtcgaa
ggcgccagtataaacacaacatatgttttttgggtaatggcactttaccttttgcgtggt
ttgttctatgaaattggggcttactattctaattattttatgaccaatgcagtgcaaaat
acagtacgggacatgcgcaatgagttgagttctaaaattaatcaaattccagtttcttac
tttgataagcatcaatttggagatttactagggcgctttaccagtgatgtagagactgtt
tcaaatgcgcttcaacaatcattcttacaagttgtaaatgcggttttgaccattacctta
gttatcggaatggtcttgtatcttaattttcaactggctttgatagtgattgctagcatt
ccattgacctattttggggcgacctttattttgaaaaaatcacaaccgtattttaaaaag
caagcagatacgctaggtgtcatgaatggatttgttcaagaaaatctaactggttttaat
gtgctgaaactctatggtcgtgaagaaacatcttcagacgattttcgagaaatcacgcaa
aacctccaagaagtcgggttcaaagctagttttatttctggcttgatgatgccaattttg
aacgcaatttcagatttgacttatctgcttgtagcagttgttggtggtttgcaagtcatt
tctggacaattaacaattgggaacatgcaagcttttgtacaatatgtatggcaagtaaac
caaccaattcaaaatttaacgcagttagctgggcaattacaaagtgctaagtcttcgctg
gatcgtattttccaagtcttagatgaaccagacgaagtaacggatataaaagagcaatta
gaacatgatttgacaggacaggttagttttcaacatgttgattttcaatatgttgaaagc
aaaccgctcattcgcgacttcaatttggaggtaaagccgggtgaaatggtagcaattgtc
ggtccgaccggtgctggaaagaccaccctcatcaatctacttatgcgcttttacgatgta
acagcaggttcaatttctgttgatggtcacgatattcgcaacttatcgcgccaagattac
cgcaagcaatttggcatggtcttgcaagacgcttggctctatgaaggaacagtcaaggat
aatttgcgttttggaaatctgagtgcaacagatgaagaaattatggacgctgccaaagct
gctaatgtagatcatttcattcggacactcccaggtggctataatatggaaatgaatcag
gaatctagcaatatctcgctggggcaaaaacaattattgaccattgcgcgagcactattg
gcaaatcccaaaatcttaattttggatgaagcaacctcgtcagtggatacgcgcttagag
ctcttgattcaaaaagcgatgaagaacctcatgcaaggacggacaagctttgtcattgct
caccgcttatcgacaattcaagaagctgataaaattttagtccttaaagacggacaaatt
attgaacaaggaactcatgaatcacttctagctgatagaggcttctattatgatttatat
acgagccaatttgctaagaaagaagcttaa
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