Streptococcus intermedius JTH08: SCIM_1278
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Entry
SCIM_1278 CDS
T02156
Symbol
gatB
Name
(GenBank) aspartyl/glutamyl-tRNA amidotransferase subunit B
KO
K02434
aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:
6.3.5.6
6.3.5.7
]
Organism
sie
Streptococcus intermedius JTH08
Pathway
sie00970
Aminoacyl-tRNA biosynthesis
sie01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sie00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
SCIM_1278 (gatB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
sie03029
]
SCIM_1278 (gatB)
Enzymes [BR:
sie01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.6 asparaginyl-tRNA synthase (glutamine-hydrolysing)
SCIM_1278 (gatB)
6.3.5.7 glutaminyl-tRNA synthase (glutamine-hydrolysing)
SCIM_1278 (gatB)
Mitochondrial biogenesis [BR:
sie03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
SCIM_1278 (gatB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GatB_N
GatB_Yqey
DUF7489
Motif
Other DBs
NCBI-ProteinID:
BAM23932
LinkDB
All DBs
Position
complement(1458312..1459745)
Genome browser
AA seq
477 aa
AA seq
DB search
MNFETVIGLEVHVELKTNSKIFSPAPAHFGEDPNANTNIIDWSFPGVLPVMNKGVIDYGI
KAALALNMDIHQKMHFDRKNYFYPDNPKAYQISQFDEPIGYNGWIEIELEDGTTKKIRIE
RAHLEEDAGKNTHGSDGYSYVDLNRQGVPLIEIVSEADMRSPEEAYAYLTALKEIIQYTG
ISDVKMEEGSMRVDANISIRPYGQKEFGTKTELKNLNSFNFVRKGLAFEEKRQAEILRSG
GQIRQETRRYDEATGETLLMRVKEGSADYRYFPEPDLPIFEIEDAWIEQVRSSLPAFPKE
RRAKYVGDYGLSDYDAKQLTATKAVSDFFEAAVAAGGDAKAVSNWLQGEVAQYLNAEGKT
ISEIDLTPENLTEMIALIADGTISSKIAKKVFVHLAKNGGSAKEYVQKAGLIQISDPAQL
LPIIQEVFANNEKAINDYKGGNKNAAKSLIGQLMKATKGQANPQVAQKLLNEELEKL
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgaactttgaaacagttatcggactggaagtccatgttgaattgaagaccaattcaaaa
attttctcaccggctccagctcacttcggtgaagatccaaatgccaacaccaatatcatt
gactggtcttttccaggtgtcctgcctgttatgaacaagggtgtcattgactatggtatc
aaggctgctctggccttgaatatggatattcaccagaagatgcactttgaccgcaagaat
tacttctatccggacaatccaaaagcctatcaaatttctcagtttgatgagccaattggc
tacaatggctggattgagattgagctagaagacggcacaaccaagaaaatccgtatcgag
cgggcccacttggaagaagacgctggaaagaatacccacggcagcgatggatactcttat
gtggacctcaaccgccaaggggtaccattgattgagattgtatctgaagcggatatgcgc
agtccagaagaagcttatgcctatctgactgctctcaaggaaatcatccagtacactggc
atttctgatgtcaagatggaagagggctccatgcgggtcgatgcaaatatttccatccgt
ccttacggccagaaagagtttggtaccaagactgagctgaaaaaccttaactccttcaac
tttgtccgtaagggtctagcatttgaggaaaaacgtcaagcagaaatcctacgcagcggc
ggtcaaatccgtcaggaaacccgtcgttatgacgaagcaactggcgaaactctgctcatg
cgggttaaggaaggttcagcggactaccgttacttcccagagcctgatctaccaatcttt
gagattgaggatgcttggattgagcaagtgcgtagcagtctgccagcctttccaaaagag
cgtcgtgccaagtatgtgggcgactacggtctgtctgactacgatgccaagcagttgaca
gcgacgaaggctgtgtcagacttctttgaagcagctgttgccgcaggaggtgatgctaag
gctgtctctaactggctccaaggagaagtagcgcaatacctcaatgccgaaggtaagacc
atctctgagattgatctgacacctgagaacttgactgagatgattgctctgattgcagat
ggaacgatttcctctaagattgctaagaaggtctttgttcatctagctaaaaatggtggc
tctgctaaagagtatgtacagaaagcaggcctgattcaaatttcagaccctgcccagctt
ctgccaattatccaagaagtatttgccaacaatgaaaaagccatcaatgactataagggc
ggtaacaagaatgcagccaagtccttgatcggccagctgatgaaggccaccaaggggcaa
gccaacccacaagtagcacaaaaactgctcaatgaagagttggagaaattatag
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