Streptococcus intermedius JTH08: SCIM_1284
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Entry
SCIM_1284 CDS
T02156
Name
(GenBank) transcriptional repressor CodY
KO
K03706
transcriptional pleiotropic repressor
Organism
sie
Streptococcus intermedius JTH08
Brite
KEGG Orthology (KO) [BR:
sie00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sie03000
]
SCIM_1284
Transcription factors [BR:
sie03000
]
Prokaryotic type
Helix-turn-helix
Other families
SCIM_1284
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CodY
HTH_CodY
MarR_2
HTH_11
HTH_20
HTH_24
HTH_Crp_2
HTH_36
MarR
TrmB
Rrf2
GntR
HTH_5
HTH_IclR
Ribosomal_S25
DUF7343
WHD_RecQ_mid_bact
DUF4423
HTH_ParB
GAF
HTH_29
Acetyltransf_8
FilR1_N
HTH_41
HxlR
Motif
Other DBs
NCBI-ProteinID:
BAM23938
LinkDB
All DBs
Position
complement(1464273..1465061)
Genome browser
AA seq
262 aa
AA seq
DB search
MANLLAKTRKITSILRRSDERLQDELPYNAITQQLAEIMDCNACIVNSKGRLLGYFMRYK
TNNDRVEAFYQTKIFPEEYVRTANLMYDTEANLPVNHDLSIFPIETKDEFPDGLTTISPI
HVSGIRLGTLIVWRNDKEFDDDDLILVEIASTVVGIQLLNFQREEDEKNIRRRTAVTMAV
NTLSYSELRAVSAILGELSGNEGQLTASVIADRIGITRSVIVNALRKLESAGIIESRSLG
MKGTYLKVLIPDIFEEIKKRDY
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
atggcaaacttattagcaaaaacaagaaaaataacatctattttgcgtcgttcagatgag
cgattgcaggatgaactaccttataatgcaattacccaacaattagctgaaattatggat
tgcaatgcttgtattgtaaatagcaagggtcgtcttttggggtatttcatgcgctacaag
acaaacaatgatcgtgtggaagcattttatcaaacgaaaatcttcccagaagagtatgtt
cgcaccgcaaatttgatgtatgatactgaggccaatcttccagtcaatcatgatttatct
atttttcctattgagacaaaagatgaatttccagatggcttgacgacaatttcaccgatt
catgtttctgggattcgtttagggacattgattgtttggcgcaatgataaagaatttgac
gatgatgatttgatcttggttgaaattgcaagtacagtggttggtattcagctactcaac
ttccaacgagaagaagatgaaaaaaatattcgacgtcgaacagctgtaactatggctgta
aatactttgtcttattcagaattacgagctgtttctgctattttaggtgaattaagcggc
aatgaagggcagctaacagcttcagtgattgcagatcgtattggcattacgcgctcagtg
attgtcaatgctctacgtaaactagaaagtgcaggcattatcgaaagtcgttctctagga
atgaaaggaacctatcttaaagttcttatccctgatatctttgaagagattaaaaagcga
gattactga
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integrated database retrieval system
