Streptococcus intermedius JTH08: SCIM_1334
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Entry
SCIM_1334 CDS
T02156
Symbol
truA
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
sie
Streptococcus intermedius JTH08
Brite
KEGG Orthology (KO) [BR:
sie00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sie03016
]
SCIM_1334 (truA)
Enzymes [BR:
sie01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
SCIM_1334 (truA)
Transfer RNA biogenesis [BR:
sie03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
SCIM_1334 (truA)
Prokaryotic type
SCIM_1334 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
Pus10_C
NBD94
Motif
Other DBs
NCBI-ProteinID:
BAM23988
LinkDB
All DBs
Position
complement(1519693..1520472)
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AA seq
259 aa
AA seq
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MSIFSCYNKHMTRYKAIISYDGHDFAGFQRQPHERSVQEEIEKTLIKINGGKQVVIHGAG
RTDSGVHALEQVIHFDLPQKRDEEKLRFALDTQTPEDIDFISVEEVDDKFHSRYWKHSKT
YEFIVDIGRPKNPMMRHYATHYPYPLDLKLMEKAIVKLEGTHDFTGFTASGTSVENKVRT
ITRARLEFDENRNFLIFTFSGNGFLYKQIRNMVGTLLKIGNGRMPVEQIDRILIEQDRHL
AGPTAAPNGLYLKEIRYEE
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
atgagcattttttcttgttacaataaacacatgacacgatacaaagcgattatttcttat
gatggccatgattttgctggttttcagcgacaacctcatgaacgtagtgtacaggaagaa
attgaaaagaccttgatcaaaatcaatggtggaaaacaagttgttatccatggagctgga
cgcacggacagtggtgttcacgctttggaacaagtcattcattttgatttgccacaaaaa
agagatgaagaaaagctacgttttgctcttgatacacagacgccagaagacattgatttt
attagtgtagaagaggtggatgataagtttcattccagatattggaaacatagcaaaacc
tatgaatttatagtagatattggacgccctaaaaatcccatgatgcgtcattatgcaaca
cattatccttatccacttgatttaaaactgatggaaaaagcaatcgtaaagctagaagga
actcatgattttacgggatttacagcttcagggactagtgtagaaaataaagttcgaaca
attacaagagcacgtttagagtttgatgaaaatcgtaattttctgatttttaccttctct
ggtaatggatttttatataagcaaattcgcaatatggttggaacattgctgaaaattggg
aatggacgaatgccggttgagcagattgatagaattttaatagagcaagatcgtcatttg
gctggtccaacagcggctccaaacggactttatctaaaggagatacggtatgaagaataa
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