Streptococcus intermedius JTH08: SCIM_1379
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Entry
SCIM_1379 CDS
T02156
Symbol
cysS
Name
(GenBank) cysteinyl-tRNA synthetase
KO
K01883
cysteinyl-tRNA synthetase [EC:
6.1.1.16
]
Organism
sie
Streptococcus intermedius JTH08
Pathway
sie00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
sie00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
SCIM_1379 (cysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sie01007
]
SCIM_1379 (cysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sie03016
]
SCIM_1379 (cysS)
Enzymes [BR:
sie01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.16 cysteine---tRNA ligase
SCIM_1379 (cysS)
Amino acid related enzymes [BR:
sie01007
]
Aminoacyl-tRNA synthetase
Class I (G)
SCIM_1379 (cysS)
Transfer RNA biogenesis [BR:
sie03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
SCIM_1379 (cysS)
Prokaryotic type
SCIM_1379 (cysS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1e
tRNA-synt_1g
DALR_2
tRNA-synt_1f
tRNA-synt_1
tRNA-synt_1d
Motif
Other DBs
NCBI-ProteinID:
BAM24033
LinkDB
All DBs
Position
complement(1567042..1568385)
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AA seq
447 aa
AA seq
DB search
MIKIYDTMTRSLREFVPIEEDKVRMYVCGPTVYNYIHVGNARSTVAFDTVRRYFEYRGFE
VNYISNFTDVDDKIIHRAKEEGITPKEVADKYIAAFREDVTALGVKPATRHPRVVEFMAD
IIRFVEDLIGKGFAYESQGDVYFRVEKSHNYAKLANKTLADLELGASGRTDEETARKENP
VDFALWKAAKPGEISWDSPWGAGRPGWHIECSVMSTEILGNTIDIHGGGADLEFPHHTNE
IAQSEAKTGQTFSNYWMHNGFVNIDDVKMSKSLGNFITVHDALKTIDGQVLRFFFATQHY
RKPINFTEKAVHDAATNLKYLKNTYEQPFTGQTDSAQLQTLLDKFTAAMDEDFNAANGIT
VVFELAKWINSGNYTAEVKEAFAKLLEVFGIVFVEEVLDADVEHLIEERQMARANRDFAT
ADRIRDELAAQGIKLLDTKDGVRWTRD
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgatcaaaatctatgatactatgactcgcagcctgcgtgaatttgtgcctattgaggag
gacaaggttcgcatgtatgtctgcggtccgacggtttataactatatccatgtcggcaat
gcccgctcaacagtagcttttgacacagttcgtcgctattttgagtatcggggatttgag
gtcaattatatttccaattttacagatgtagatgataagattatccatcgcgccaaggaa
gaaggcatcacaccaaaagaagtggctgataagtatatcgcagcttttcgtgaggatgtc
acggccttgggtgtcaaacctgcgactcgccatccacgagtagtcgagtttatggctgac
attatccgctttgtggaagacttgattggaaaaggctttgcctatgagagtcaaggcgat
gtctatttccgagtggaaaagtctcacaattatgccaaactagccaacaaaaccttggct
gacttggagttaggtgcttctggtcggacagatgaggagactgctcgtaaggaaaatcca
gtggactttgctctctggaaagcagccaagccgggtgagatttcctgggacagtccttgg
ggagcaggtcgtccgggctggcacatcgagtgttcggttatgtcaacggagattttggga
aataccattgatatccacggtggaggagcagatttagagtttcctcaccataccaatgaa
atcgcccagtcagaggccaagacgggtcagactttttccaactactggatgcacaatggc
tttgtcaacattgatgacgtcaagatgtctaagtctttaggtaattttatcaccgttcat
gatgccctcaagactattgatggtcaagtgttgcgtttcttctttgctacccagcattat
cgcaagccgattaattttacggaaaaagccgttcatgatgccgcgactaatctcaagtat
ttgaagaatacctatgagcagcctttcactggtcagacagattcagcgcagcttcaaacc
ttgctggacaagttcactgccgctatggacgaagatttcaatgcggccaacggtatcacg
gttgtctttgagctagccaagtggattaactcaggcaattacaccgctgaagtcaaggaa
gcctttgccaagctcttagaagtttttggtattgtctttgtagaagaagtcctagacgcg
gacgttgagcacttgattgaggagcgccagatggcgcgtgctaatcgggactttgcgact
gcagaccgtattcgggatgaattagctgctcagggcattaagctcttggataccaaggac
ggagtgaggtggacccgtgactga
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