Streptococcus intermedius JTH08: SCIM_1509
Help
Entry
SCIM_1509 CDS
T02156
Symbol
pbp1b
Name
(GenBank) penicillin-binding protein 1B
KO
K03693
penicillin-binding protein 1B
Organism
sie
Streptococcus intermedius JTH08
Pathway
sie00550
Peptidoglycan biosynthesis
sie01100
Metabolic pathways
sie01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
sie00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
SCIM_1509 (pbp1b)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
SCIM_1509 (pbp1b)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
sie01003
]
SCIM_1509 (pbp1b)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sie01011
]
SCIM_1509 (pbp1b)
Glycosyltransferases [BR:
sie01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
SCIM_1509 (pbp1b)
Peptidoglycan biosynthesis and degradation proteins [BR:
sie01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
SCIM_1509 (pbp1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transgly
Transpeptidase
Motif
Other DBs
NCBI-ProteinID:
BAM24161
LinkDB
All DBs
Position
complement(1723529..1725868)
Genome browser
AA seq
779 aa
AA seq
DB search
MIKQVLEKMKYLFAWLSQLSQTKFHIRKKELTLLNIGGITLRTLKLLSNVVFVLVFLGGL
FGAGIALGYGVRIFDKVEVPQKDQLVKQIRNISSISELKYADGSSISAIDSDLMRIAVES
KNISDNVKKAVIATEDENFHKHNGVVTKAVLRATLGSVAKIGSSSGGSTLTQQLIKQQVV
GDAPTFKRKATEIIDALALERYMSKEDILASYLNVAPFGRNNKGQNIAGVEEAAQGIFGV
PASKLTVPQAAFIAGLPQSPIVYSPYTADGSRKSAKDMTLGLNRAKKVIYNMYRTGAISK
DEYRLYKDYDLKRDFLPADRSSKNSHDYLYYVALKEAKKAMYDYLISRDNVSQQELKDDA
TVKAYQELAAKELSDGGYTVTTTINRKVHNAMQKAVANFGSVLDDGTGAVEAGNVLMDNR
TGAVLGFIGGRNYASNQNNHAFDTERSPGSTIKPILAYGIAIDQGLMGSASMLSNYPANF
SNGDPIMHVDSRGTAMMDLQEALNTSWNIPAYWTYKLLRDKGVNVRGYMEKMGYQIDNYD
IESLPMGGGVEVSVAKHTNGFQTLANNGAYQKRYMIEKITAKDGKVVYEHKTKPAQVYSK
ATATIMQHLMRGVLSSGATTTFKSRLTQINSGLANADWIGKTGTTNNNGDMWLMVSTPKL
TLGGWIGHDNNASMAALTGYNNNAQYMAHLVNAIYQADPSIWGVKDKFNLDSSVIKSNVL
KATGEKSGNVSVNGRTINATGQTVTSYWAKNGAPTTTYKFGIGGTDSDYQKAWEALLGK
NT seq
2340 nt
NT seq
+upstream
nt +downstream
nt
atgattaaacaagtgttagaaaagatgaaatacctgtttgcatggctgtctcagctgtct
caaacaaagtttcatatcagaaaaaaagaattaactcttttgaatattggcggcattacg
cttcgaactttgaaattgttgtcgaatgttgtttttgtattggtctttttaggtggtttg
tttggggcaggaattgctcttggttacggagtaagaatttttgataaagtagaagttccg
caaaaagatcaattagttaaacagattcggaatatttcctctatttcagaattgaaatat
gctgatggaagctctatttcagccattgacagtgatttaatgcggattgcagtagagagt
aagaatatttctgataatgtaaaaaaggccgtcattgcgactgaagatgaaaatttccac
aagcataatggagtggttacaaaagcagttttgcgagccacactaggttctgttgcgaag
attggttcttccagtggtggttctaccttaactcagcaattgattaagcagcaggttgtg
ggagatgcgccgacctttaagcgaaaggcaactgaaattattgatgctctggctttagag
cgttatatgagtaaagaggatattttagcatcttatctcaatgttgcaccattcgggcgt
aacaataaagggcaaaatattgctggtgtggaagaagccgctcaaggaatttttggagtg
cctgctagcaagttgacagttcctcaagcagcttttattgctgggctgccacaaagtccg
attgtctattctccttacacggctgatggtagtcgaaaaagtgctaaagacatgacattg
ggactcaatcgtgcaaaaaaagtcatttataatatgtatcgaactggtgcaattagtaaa
gatgaataccgattgtacaaagattatgatttaaaacgggattttctacctgccgatcgc
tcttcaaaaaattcgcatgattacttatattacgttgctctgaaagaagcgaaaaaagca
atgtatgattatttgattagtcgggataatgtttcacaacaggaattgaaagatgatgca
acggtcaaggcttatcaagaattagcagcaaaagagctaagcgatggtggctatactgtt
actacaacgattaacagaaaagttcacaatgctatgcaaaaagcggttgctaattttggt
agtgtattagatgatgggacgggtgcggttgaagccggaaatgttctcatggacaatcgt
acaggagctgttttgggttttataggaggacgtaattatgcttctaatcaaaacaaccac
gcttttgatacggagcgctcgcccggttcaacgattaaaccgattttagcttatgggata
gccattgaccaaggtctgatgggaagcgccagcatgctgtctaattatccagcaaatttc
tctaatggcgatcccattatgcatgtggacagtcgtggaacagcgatgatggatttacag
gaggctttaaatacttcttggaacattcctgcttattggacttataaattacttcgcgac
aaaggggtcaatgtccgaggatatatggaaaaaatgggttatcagattgataattatgat
attgaaagcctaccaatgggaggtggtgttgaagtatctgttgctaaacacacgaatggt
tttcaaaccttagctaacaacggagcatatcaaaagcgctatatgattgaaaagattacg
gcaaaagacgggaaagttgtctatgagcataaaacaaaacctgctcaagtttattccaaa
gcaacagcgacaattatgcaacatctcatgcgcggagttctgagttcaggtgctacaacg
actttcaaatctcgtttaacacagatcaatagtggcttggctaatgccgattggattggg
aaaactgggacaactaacaataatggagatatgtggctcatggtatctactcctaaatta
acattaggaggttggattggtcatgataacaatgcctcaatggcggctttaacgggttac
aataacaatgcgcagtacatggctcatttggtgaatgcaatttaccaagcagatccaagt
atttggggcgttaaagataagtttaatcttgattctagcgttattaaatcaaatgtcctt
aaagcaactggtgaaaaatctggaaatgtcagtgtgaatggtcgtacgattaatgcaact
ggccaaacagtcacaagttactgggccaaaaacggagcgccgactacaacttataaattt
ggaattggtgggacagacagtgattatcaaaaagcttgggaagcacttttaggaaaataa
DBGET
integrated database retrieval system
