Streptococcus intermedius JTH08: SCIM_1681
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Entry
SCIM_1681 CDS
T02156
Symbol
trmU
Name
(GenBank) tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
KO
K00566
tRNA-uridine 2-sulfurtransferase [EC:
2.8.1.13
]
Organism
sie
Streptococcus intermedius JTH08
Pathway
sie04122
Sulfur relay system
Brite
KEGG Orthology (KO) [BR:
sie00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
SCIM_1681 (trmU)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sie03016
]
SCIM_1681 (trmU)
Enzymes [BR:
sie01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.13 tRNA-uridine 2-sulfurtransferase
SCIM_1681 (trmU)
Transfer RNA biogenesis [BR:
sie03016
]
Prokaryotic type
tRNA modification factors
Thiolation factors
SCIM_1681 (trmU)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_Me_trans
tRNA_Me_trans_C
tRNA_Me_trans_M
NAD_synthase
DUF7411
QueC
Arginosuc_synth
Asn_synthase
ATP_bind_3
ThiI
GIDE
Motif
Other DBs
NCBI-ProteinID:
BAM24333
LinkDB
All DBs
Position
complement(1903957..1905078)
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AA seq
373 aa
AA seq
DB search
MRDNSKIRVVVGMSGGVDSSVTALLLKEQGYDVIGIFMKNWDDTDEFGVCTATEDYKDVA
AVADQIGIPYYSVNFEKEYWDRVFEYFLAEYRAGRTPNPDVMCNKEIKFKAFLDYALTLG
ADYVATGHYAQVKRDEDGLVHMLRGKDNNKDQTYFLSQLSQEQLQKTMFPLGHLEKPEVR
AIAEKAGLATAKKKDSTGICFIGEKNFKEFLSQYLPAQPGRMMTFEGRDMGQHAGLMYYT
IGQRGGLGIGGQNGGDNEPWFVVGKDLSQNILYVGQGFYHDNLMSTSLDASQVHFTKEMP
EEFTMECTAKFRYRQPDSKVTVTVKGDKAIVNFAELQRAITPGQAVVFYDGEECLGGGLI
DNAYKNGKLQQYI
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgataactctaaaattcgtgtcgttgttggtatgagcggaggtgttgattcatca
gtaactgctttgctcttgaaagagcaaggttatgatgtgattggcatcttcatgaaaaac
tgggacgatacagatgaatttggtgtttgcacagctacagaagactacaaggatgtagca
gctgttgcagatcaaattggcattccttactactctgtcaactttgaaaaggagtactgg
gatcgcgtttttgaatatttcttggcagaataccgagctggtaggactccaaacccagat
gtcatgtgtaacaaggaaatcaagtttaaagccttccttgactatgccttgacactggga
gcagattatgttgcaactggtcattatgctcaggtaaagagagatgaagatggcctagtc
cacatgctgagaggtaaggataataacaaggatcagacttactttctaagtcaactgtct
caggaacaacttcagaagactatgtttcctctggggcatctagaaaagccagaagttcga
gcaattgctgaaaaagcaggtttagccactgctaagaaaaaagactcaactggtatttgc
ttcattggcgaaaagaattttaaagaatttctgagccaatacttacctgcccaacctggt
cgcatgatgacctttgaaggtcgagatatgggccagcatgcaggcttaatgtattatact
attggccagcgaggtggtcttggaattggcggtcagaatggtggtgataatgaaccttgg
ttcgttgttggaaaagatctcagtcaaaatattctttatgttggtcaaggcttttatcat
gacaacttaatgtcaaccagtcttgacgctagtcaggttcatttcacaaaagaaatgcca
gaagaatttactatggagtgtactgctaagtttcgctatcgtcagccagattctaaggtg
acagttactgtaaagggtgacaaggcaattgtcaattttgcagaattgcaacgcgctatt
acacctggacaagctgttgtattttatgatggagaagagtgtcttggtggaggcctaatt
gacaatgcttataaaaatggaaagcttcaacagtatatttaa
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