Streptococcus infantarius subsp. infantarius: Sinf_0381
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Entry
Sinf_0381 CDS
T01765
Name
(GenBank) ATP-dependent RNA helicase, DEAD/DEAH box family
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
sif
Streptococcus infantarius subsp. infantarius
Brite
KEGG Orthology (KO) [BR:
sif00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sif03019
]
Sinf_0381
03009 Ribosome biogenesis [BR:
sif03009
]
Sinf_0381
Enzymes [BR:
sif01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Sinf_0381
Messenger RNA biogenesis [BR:
sif03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Sinf_0381
Ribosome biogenesis [BR:
sif03009
]
Prokaryotic type
rRNA helicases
Sinf_0381
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Helicase_RecD
SWI2_SNF2
Motif
Other DBs
NCBI-ProteinID:
AEZ61739
LinkDB
All DBs
Position
396844..398229
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AA seq
461 aa
AA seq
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MSFNDFNFKPYIRVALAELKFKNPTEVQQKLIPVVRSGRDLVGESKTGSGKTHTFLLPIF
EKLDETSDNVQVVITAPSRELVTQIYQATKQIADKSETEIRVANYVGGTDKLRQIEKLKS
SQPHIVIGTPGRIYDLVKSGDLEIYKAHTFVVDEADMTLDMGFLDTVDKIASTLPKDVQI
LVFSATIPQKLQPFLKKYLTNPVMEKIKTTTVIADTIDNWLVSTKGRDKNAQILEITKAL
NPYLAMIFVNTKERADELHSYLVSNGLKVAKIHGGIPPRERKRTMNQTKKLSYEYIVATD
LAARGIDIEGVSHVINDAIPQDLSFFVHRVGRTGRNGLNGIAITLYQPSDDSDIRELEKL
GIKFVPKMLKNGEFQDTYDRDRRANREKSYQKLDTEMIGLVKKKKKKSNLVTRKKFNGKL
MKNANANAVQLTVLKGVPNVKQENKLSNIKSSLKQKFQAIF
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgtcttttaacgattttaattttaagccctacatccgtgttgcactcgcagagcttaaa
ttcaaaaatccgacagaagtgcaacaaaaattaattcccgttgtacgttcaggtcgtgat
ctggtaggtgaatcaaaaactggttcagggaaaacacacactttcttgctaccaatcttt
gaaaaattggatgaaacaagcgacaacgtccaagttgttatcacagcaccaagccgtgaa
ttggtaacacaaatctatcaagctacaaaacaaattgcagataaatctgaaacagaaatt
cgtgtagcaaattatgttggtgggacagataaacttcgtcaaattgaaaaactaaaatca
tctcaaccacatatcgtcatcggaacacctggtcgtatctatgatttggttaaatctggc
gaccttgaaatctacaaggcacacacttttgtagttgatgaagctgatatgacgcttgat
atgggatttcttgatacggttgataagattgctagcacattgccaaaagatgttcaaatt
ttggtcttctcagcaactattccacaaaaattacaaccgttcttgaagaaatatttgaca
aatcctgtcatggaaaaaataaagacaacaacagttatcgcagataccatcgataactgg
ttggtatccactaaaggtcgtgataaaaatgctcaaattttggaaatcacaaaagctctt
aacccataccttgctatgattttcgtgaacaccaaagaacgtgcggatgaattgcacagc
taccttgtatcaaatggtttgaaagttgctaaaatccacggtggtattccaccacgtgaa
cgtaaacgtacgatgaaccaaaccaaaaaactttcttacgaatacatcgtggcaacagat
ttggcagcgcgtgggattgatattgaaggggttagtcacgttatcaacgatgcgattccg
caagatttgtcattctttgttcaccgtgttggacgtacaggacgtaacggtttgaatggt
attgccatcacactttaccaaccaagtgacgattcagatattcgtgaacttgaaaaatta
ggtattaaattcgtaccaaaaatgcttaaaaatggtgaattccaagatacttatgatcgt
gatcgccgtgccaaccgtgaaaaatcataccaaaaacttgatactgaaatgattggtttg
gttaagaagaaaaagaaaaaatcaaacctggttacaagaaaaaaattcaatggaaagttg
atgaaaaacgcaaacgcgaacgccgtgcagctaaccgtgctaaagggcgtgccgaacgta
aagcaagaaaacaaactttctaatatcaaaagtagtctgaaacaaaagtttcaggctatt
ttttag
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