Streptococcus infantarius subsp. infantarius: Sinf_0909
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Entry
Sinf_0909 CDS
T01765
Symbol
topA
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
sif
Streptococcus infantarius subsp. infantarius
Brite
KEGG Orthology (KO) [BR:
sif00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sif03032
]
Sinf_0909 (topA)
03400 DNA repair and recombination proteins [BR:
sif03400
]
Sinf_0909 (topA)
Enzymes [BR:
sif01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
Sinf_0909 (topA)
DNA replication proteins [BR:
sif03032
]
Prokaryotic type
DNA Topoisomerases
Sinf_0909 (topA)
DNA repair and recombination proteins [BR:
sif03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Sinf_0909 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
DUF2996
Toprim_4
Beta-Casp
C1_2
Motif
Other DBs
NCBI-ProteinID:
AEZ62245
LinkDB
All DBs
Position
complement(929259..931397)
Genome browser
AA seq
712 aa
AA seq
DB search
MATTTTKAQTAVKKTSKKTTKKKTAAKKNLVIVESPAKAKTIEKYLGRNYKVVASVGHIR
DLKKSSMSIDFENNYEPQYINIRGKGPLINDLKKEAKKSKKVYLASDPDREGEAISWHLA
HILGLDENEKNRVVFNEITKDAVKNAFVEPRQIDMDLVDAQQARRVLDRIVGYSISPLLW
KKVKKGLSAGRVQSVALKLIIDRENEIRNFKPEEYWTIDGFFKKGTKKFQAAFYGIDGKK
LKLSTNEEVQEVLARLTSDEFNVAKVEKKERRRNAPLPYTTSSLQQDAANKINFRTRKTM
MVAQQLYEGISLGKSGTQGLITYMRTDSTRISPVAQNDAAGFITERFGENYSKHGNRVKN
ASGAQDAHEAIRPSNVNLTPESIAKHLDKDQLKLYTLIWNRFVASQMTAAVFDTMKVNLE
QNGVRFTANGSKVKFDGYLAVYNDSDKNKMLPDMVEGDVVKKVSTSPEQHFTQPPARYSE
ATLIKTLEENGVGRPSTYAPTLDVIQRRYYVRLVSKRFEPTELGEIVNNLIVEFFPDIVD
VKFTADMEGKLDEVEEGKEQWQKVIDAFYKPFEKELAKAETEIEKIQIKDEPAGFDCDVC
GHPMVIKLGRYGKFYACSNFPECHNTKAITKEIGVTCPICGEGQVIERKTKRNRLFYGCD
RYPECEFTSWDKPVGRSCPKCGQFLVEKKIRGGGKQVVCSSEECDYEEAKVK
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atggcaacgactactacaaaagcccaaacagctgttaaaaagacaagtaaaaaaacaaca
aagaaaaaaacagctgccaagaaaaacttggttattgtggaatcaccagctaaagcaaaa
accattgaaaaatatctaggacgcaactataaagttgtcgcttcagttggtcatatccgt
gatttgaaaaaatcaagcatgtctattgattttgaaaataattatgaaccgcaatatatt
aatatccgcggtaaaggtcctctgattaacgatttgaaaaaagaggctaaaaaatctaaa
aaagtttatctcgcaagtgacccggaccgcgagggagaagctatttcatggcatttggca
cacattttgggacttgatgaaaacgagaaaaaccgtgttgttttcaatgaaatcaccaaa
gacgctgtcaaaaatgcctttgttgaaccacgccaaatcgatatggatttggtagatgcg
caacaagcccgtcgagttcttgaccgtattgttgggtattctatctcaccattgctttgg
aaaaaggttaaaaaaggtctttctgcaggtcgcgttcagtctgttgcattaaaactcatt
atcgaccgtgaaaatgagattagaaactttaaacctgaagaatactggacaattgatgga
ttcttcaaaaaaggaactaaaaaattccaagctgctttttatggcatcgatggtaaaaaa
ctaaaacttagcactaacgaagaagtgcaagaagttcttgctcgtcttactagtgatgaa
tttaacgtagcaaaagttgaaaagaaagagcgtcgtcgtaacgcaccacttccatataca
acatcatctcttcaacaagatgctgctaacaaaatcaacttccgtacacgtaagactatg
atggttgctcaacagttgtacgaagggattagtcttggtaagagtggtacacaaggtttg
attacttacatgcgtaccgactctacacgtatcagccctgttgcgcaaaatgatgctgca
ggctttattactgaacgtttcggtgaaaattactctaaacacggtaatcgtgtgaaaaat
gcttcaggtgctcaagatgcccacgaagctattcgcccatcaaacgttaacttaacacca
gaatctatcgcaaaacacttggacaaagaccaattgaaactctacacattgatttggaat
cgatttgtcgcaagtcaaatgacagctgcggtgtttgataccatgaaagttaacttggag
caaaatggcgtgcgcttcacagctaacggtagtaaagtcaaatttgacggttacttggct
gtctacaacgattctgataagaataaaatgttgcccgacatggttgaaggcgatgttgtt
aagaaagtttcaacaagtcctgaacaacactttactcaaccacctgcacgttattctgaa
gccactctgattaaaacccttgaagaaaacggtgttggtcgaccatcaacttacgcacca
acactcgatgtcatccaaagacgttactacgttcgcttggtttcaaaacgcttcgaacca
actgaattaggcgaaatcgttaataacttgattgttgaattcttcccagatatcgttgat
gtcaaatttaccgctgacatggaaggtaaacttgatgaagtcgaagaaggaaaagaacaa
tggcaaaaagtcattgatgctttttacaaaccatttgaaaaagaactagcaaaagcagaa
actgaaattgaaaaaattcaaatcaaagatgagcctgctggttttgactgtgacgtttgt
ggacacccaatggtaatcaaattaggacgctatggtaaattctacgcttgtagcaatttc
ccagaatgtcacaataccaaagccatcacaaaagaaattggtgtgacttgtccaatttgt
ggcgaaggtcaagtgattgaacgtaagacaaaacgtaatcgtcttttctatggctgtgac
cgatatcctgagtgtgaattcacttcatgggataaaccagtcggacgttcttgtccaaaa
tgtggtcaattcctcgttgagaagaaaattcgtggcggtggtaaacaagtcgtctgcagc
agcgaagaatgtgactacgaagaagcaaaagttaaataa
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