Streptococcus infantarius subsp. infantarius: Sinf_1000
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Entry
Sinf_1000 CDS
T01765
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
sif
Streptococcus infantarius subsp. infantarius
Brite
KEGG Orthology (KO) [BR:
sif00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sif03016
]
Sinf_1000 (truB)
Enzymes [BR:
sif01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
Sinf_1000 (truB)
Transfer RNA biogenesis [BR:
sif03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Sinf_1000 (truB)
Prokaryotic type
Sinf_1000 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB_C
DUF2888
Motif
Other DBs
NCBI-ProteinID:
AEZ62332
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All DBs
Position
complement(1025259..1026140)
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AA seq
293 aa
AA seq
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MINGIINLKKEAGMTSHDAVFKLRKILHEKKIGHGGTLDPDVVGVLPIAVGKATRVIEYM
TEAGKVYRGQICLGFSTTTEDASGEVVEKTPVSTELTEDTVDQAMESFIGDITQIPPMYS
AVKVDGKRLYEYARAGQTVERPERHVTIYDFKRTSPLEFKDDCCYFDFEVACSKGTYIRT
LSVDLGKSLGFGSHMSYLERQASAGLQLEDALTLSEITEKVAQDDFSFLLPIEYGVMDLP
RVALTEDQVTEISFGRKIALDRTEEQLAAFYQDKVVAILIPRDDLYKPNKVFI
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atgattaacggaattattaatttgaaaaaagaagctggaatgactagccatgatgcagtc
tttaagcttcgtaaaattttacatgaaaagaaaattggtcatggtggaacgcttgatcct
gacgttgttggagtcttgccaattgctgtcggaaaagcaacacgtgtgattgaatatatg
acagaagctggaaaagtataccgtgggcagatttgcctaggtttttcaacaacaactgaa
gatgccagtggtgaagttgttgagaagactccagtttcaacagagctgacagaagatacc
gttgaccaagctatggaaagttttattggtgatattactcagattccaccaatgtattct
gctgttaaggtcgatgggaaacgattatacgaatatgctcgcgctggacaaacagttgag
cgacctgaacgtcatgtgacaatctatgatttcaaacgcactagtccattagaatttaaa
gatgattgttgttattttgactttgaagttgcttgtagtaaaggaacttacattagaacc
ttgtcagtcgatttaggaaaatcacttggttttggcagtcatatgtcttatttggagcgc
caagcttcagctggtcttcaattggaagatgcattgactttgtctgaaatcactgaaaaa
gttgcgcaagatgatttttcatttcttttgccaattgagtatggcgttatggatttgcca
cgtgtagctttgacagaagatcaagttacagagatttcatttgggcgtaaaattgcttta
gatagaactgaagaacaattagctgctttctatcaagataaagttgttgctattctaatt
ccacgtgatgacctatacaaaccaaataaagtgtttatataa
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