Streptococcus infantarius subsp. infantarius: Sinf_1628
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Entry
Sinf_1628 CDS
T01765
Symbol
uvrA
Name
(GenBank) excinuclease ABC
KO
K03701
excinuclease ABC subunit A
Organism
sif
Streptococcus infantarius subsp. infantarius
Pathway
sif03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
sif00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Sinf_1628 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sif03400
]
Sinf_1628 (uvrA)
DNA repair and recombination proteins [BR:
sif03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Sinf_1628 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Sinf_1628 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_DNA-bind
UvrA_inter
ABC_tran
SMC_N
AAA_16
AAA_29
RsgA_GTPase
nSTAND1
AAA_22
AAA_33
nSTAND3
AAA_23
AAA_21
AAA_18
NACHT
AAA_14
DnaJ_CXXCXGXG
Viral_helicase1
ATPase
RACo_linker
DUF87
cobW
NB-ARC
MMR_HSR1
NTPase_1
Septin
PRK
DUF463
T2SSE
MeaB
Motif
Other DBs
NCBI-ProteinID:
AEZ62930
LinkDB
All DBs
Position
complement(1651712..1654537)
Genome browser
AA seq
941 aa
AA seq
DB search
MQDKLIIRGARAHNLKNVNVEIPRDKLVVVTGLSGSGKSSLAFDTIYAEGQRRYVESLSA
YARMFLGNMEKPDVDSIEGLSPAISIDQKTTSKNPRSTVGTTTEINDYLRLLYARVGTPY
CINGHGAITASSVEQIVDKVLELPERTRMQILAPVVRRKKGQHKTIFDRIQKDGYVRVRV
DGDIFDISEVPELSKSKMHNIEIVVDRLINKEGIRSRLFDSVEAALRLADGYVIIDTMDG
NELLFSEHYSCPVCGFTVPELEPRLFSFNAPFGSCPTCDGLGNKLEVDLDLVIPDRSKTL
REGALAPWNPISSNYYPAMLEQAMETFGVDMDTPFEDLTEEEQNLVLYGSGEREFHFHYV
NDFGGERNIDLPFEGVVNNINRRYHETNSDFTRNVMRGYMNELPCPTCHGYRLNNQALCV
RVGGENGLNIGQVSDLSVADHLELLNHLELSENEKTIATPIVKEIKDRLTFLNNVGLNYL
TLSRSAGTLSGGESQRIRLATQIGSNLSGVLYILDEPSIGLHQRDNDRLIDSLKKMRDLG
NTLIVVEHDEDTMRQADWLIDVGPGAGDFGGQIVASGTPEDVAKNKKSITGQYLSGAKEI
PVPLERRKGNGRVLGVKGASENNLQNIDVTFPLGKFIAVTGVSGSGKSTLVNSILKKAVA
QKLNRNSAKPGKHKALEGIENIERLIDIDQSPIGRTPRSNPATYTGVFDDIRDLFAKTNE
AKIRGYKKGRFSFNVKGGRCEACSGDGIIKIEMHFLPDVYVPCEVCHGTRYNSETLEVHY
KDKNIAEILDMTVNDAVEFFAPIPKIARKLQTIKDVGLGYVTLGQPATTLSGGEAQRMKL
ASELHKRSTGKSLYILDEPTTGLHTDDIARLLKVLQRFVDDGNTVLVIEHNLDVIKTADY
IIDLGPEGGVGGGQIVATGTPEEVAKVKESFTGQYLKDKLK
NT seq
2826 nt
NT seq
+upstream
nt +downstream
nt
atgcaagataaattgattattcgtggggctcgtgcccacaatttaaaaaatgtcaatgtt
gagattccgcgggacaaattagttgttgtgactggtttgtcggggtctggaaaatcaagt
ttggcatttgatacgatttacgcagaagggcaacgtcgttacgttgaaagcttgtctgct
tatgcccgcatgtttcttggtaatatggaaaaaccagatgtggattcgattgaaggtctt
agcccagctatttccattgaccaaaaaacaacaagtaaaaacccgcgctctactgtagga
acaacgacagaaatcaatgattatctgcgccttttgtacgctcgtgtggggacgccttac
tgtattaatgggcacggtgctattacggcatcatctgttgaacagattgttgataaggta
ttggaattacctgagcgcacaagaatgcaaattttagcgcctgttgtgcgtcgcaaaaaa
ggtcaacacaagacgatttttgatcgcattcaaaaagatggttatgtacgtgtacgcgtg
gatggtgacatttttgatatttcagaagttcctgagttatctaagagtaaaatgcacaac
atcgagattgtcgtggaccgtttgattaataaagagggcattcgttcacgtctttttgat
tctgtggaagcagcccttcgtttggcagatggttatgtcattatcgataccatggatggc
aatgaattgcttttttctgaacattattcatgtccagtatgtggctttactgttcccgaa
ttagaaccacgtttattttcatttaatgcgccatttggttcatgtccaacctgtgatggt
ttgggaaataaattggaagtcgacttggatttggtgattcctgaccgcagtaaaacgctt
cgtgagggggctttagcaccatggaatccaatctcatcaaactactatcctgctatgctt
gagcaagctatggaaacttttggtgttgatatggatacgccttttgaagacttgactgaa
gaagagcaaaatcttgtgctttacggttctggtgagcgtgaattccatttccactatgtc
aatgacttcggtggtgaacgcaatattgatcttccttttgagggtgttgttaacaatatc
aatcgtcgttaccatgagacaaatagtgattttacccgcaatgtcatgcgcggctacatg
aatgaattgccatgtccaacttgtcatggttaccgtttgaataatcaagcgctctgtgtt
cgtgtgggtggtgaaaatggtttgaatattgggcaagtgtctgatttgtcagttgctgac
cacttggaactcttgaatcatctagaactctctgaaaatgaaaaaacgattgccacacca
atcgttaaggaaatcaaagaccgtctgaccttcttaaataatgttggcttgaattatttg
accttgtcgcgttctgcggggactttatctggtggtgaaagtcagcgtattcgcttggca
acgcaaattggttcaaacttgtcgggtgtcctttatatccttgatgaaccgtcaattggt
cttcatcaacgtgacaatgatcgcttgattgatagcttgaagaagatgcgtgatcttggt
aataccttgattgtcgttgaacacgatgaagataccatgcgccaagctgattggctcatt
gatgtcggaccaggtgcaggtgattttggtgggcaaattgttgcctctggaacgccagaa
gatgttgccaaaaataaaaaatcaattacagggcagtatttgtctggagcaaaagaaatt
cctgtgccactagaacgtcgtaaaggaaatgggcgcgtgcttggtgtcaaaggtgcttct
gaaaataacctgcaaaatattgatgtgactttcccacttggtaaattcattgcggtgaca
ggtgtttcgggttctggaaaatcaaccttggttaacagtattttgaaaaaagctgttgct
caaaaattgaatcgcaattctgccaaacctggtaaacacaaggcacttgagggcattgaa
aacattgaacgcttgattgacattgaccaaagcccaatcggtcgtacgccgcgttcaaat
cctgcaacttacacaggtgtttttgatgatattcgtgacctttttgctaagaccaatgaa
gctaagattcgtggttacaaaaaaggacgtttctcatttaacgtcaaaggtggacgttgc
gaggcttgctctggtgacggaattatcaagattgaaatgcacttcttgccagatgtttac
gtaccttgcgaggtttgtcatggcacacgttataacagtgaaacgcttgaagttcattac
aaagacaaaaatatcgctgaaattcttgatatgacagtcaatgatgcggttgaattcttt
gcaccaatccctaaaatcgcacgcaaattgcaaactatcaaagacgttggacttggttat
gttactcttggacaaccagccacaacactgtctggtggtgaagcacagcgtatgaaatta
gcgagtgaacttcacaaacgctcaactggtaagagcctttatatccttgatgaaccaacg
acaggtcttcacacagatgacattgctcgtctacttaaagtccttcaacgtttcgtggat
gatggaaataccgtgcttgttattgaacacaatcttgatgtgattaagacagctgactat
attatcgaccttggaccagaaggcggtgttggtggcggacaaatcgttgccacaggcaca
ccagaagaagttgccaaagtcaaagaatccttcacaggacaatatttaaaagataaattg
aagtaa
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