Streptococcus ilei I-G2: N596_03330
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Entry
N596_03330 CDS
T02879
Name
(GenBank) DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
sig
Streptococcus ilei I-G2
Pathway
sig03420
Nucleotide excision repair
sig03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sig00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
N596_03330
03430 Mismatch repair
N596_03330
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sig03400
]
N596_03330
Enzymes [BR:
sig01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
N596_03330
DNA repair and recombination proteins [BR:
sig03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
N596_03330
MMR (mismatch excision repair)
Other MMR factors
N596_03330
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
Viral_helicase1
UvrD_C_2
AAA_30
eRF1_2
Motif
Other DBs
NCBI-GeneID:
17315902
NCBI-ProteinID:
AGY39833
LinkDB
All DBs
Position
complement(645390..647204)
Genome browser
AA seq
604 aa
AA seq
DB search
MMKNEEWHPKVDINLEKAALGAAKDVTNCLVIAGPGAGKTELLAQKLDYLFSTNKCISPK
KILALSFKTDAASNLKERVKKRYGAEYASRFTSLTYSAFEKRILDQFRNVLPGEIRPSKD
YLIEEMEVIKEVLYRNGLNTTGMRMNSIKEIAESIALSDNDPIIKNDLLKGTQSNKPVLF
YRQITKLATQIIANNEYVCKALRMTYEFVFLDEFQDTTYDQYNLLKICFLDSTCKLTAVG
DNNQAIMRWAGAKPDIFPDYIRDFNSNKYQLLMNHRSVPKLVEFQKEVHQILNSNHRSIQ
TNNYPEFQEGEITLFEFENESLEAELIANDIESKIQGGIRPSEICILAKQKVDDYSSKLI
TTLNSKGIKARIENEYQELLKDPTCNLLLDLISCSQGKRDPLIWENISNFYGNINGIDEF
TDDLILAKSYKEIDNIVRDITYLISNFIPNEESMLKLIDCIIEKIDEKRIISNFSTYNGK
SDLDIIVKNFSKLLYIEYSQTQGEWLDTVSSFKGENSIPIMTIHKSKGLEYEVVYFLGLE
DSAFWSFNDQPEEDKSAFFVALSRAKSHLIFTYCKLRNNSPQNNRNINEIYSLLTQSNLV
DVIN
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atgatgaagaatgaagagtggcatcctaaagtagatattaatttagagaaggctgcttta
ggagctgccaaggatgtgaccaactgtctagtcattgctggaccaggtgctggaaaaact
gaattattagctcaaaagttagactatcttttctctacaaataaatgtatttctccgaaa
aaaattttagcattaagttttaagacagatgctgcatcaaatttgaaagaaagagtgaaa
aaacgttatggggctgaatatgcttctcgatttacctctctaacttattcagcatttgaa
aagaggattttagaccaatttagaaatgttcttcctggagagataagaccgtcgaaagat
tatttgattgaagaaatggaagtcataaaagaggttctttatagaaatggattaaatact
actggaatgaggatgaatagcattaaggaaattgcagaaagtattgctttgagtgataat
gatccaattataaaaaatgatctgttaaaaggtactcagagtaataagccagtccttttt
tacagacaaataacaaagttggctactcaaataatagctaataacgaatacgtctgtaaa
gcacttcgaatgacatatgaatttgtatttttagatgaatttcaggatactacgtatgac
cagtataatttattaaaaatatgttttttagattcgacttgtaaattgactgcagtaggt
gataataatcaagccattatgagatgggcaggtgcaaagcctgatatttttccagactat
attcgagactttaattcaaataaatatcaattattgatgaatcaccgctctgtacctaaa
cttgtagaatttcaaaaagaggttcatcagatattaaatagtaatcatagatctattcag
acaaataattatccagaatttcaagagggtgaaataacattatttgaatttgaaaatgaa
agtttagaagctgagttaattgcaaatgatatagaatcaaaaattcaaggaggtatacga
ccatcagaaatttgtatcctagcaaaacagaaggttgatgattatagttcaaaattgata
actacattaaacagtaaagggattaaagcaagaattgaaaatgaatatcaggagctttta
aaagaccctacttgtaacctattattagatttaatatcatgtagtcaaggaaaacgagat
cctttaatttgggaaaatattagtaatttttatggaaatatcaatggaatagatgaattt
actgatgatttaattttagcaaaatcctataaggagattgacaatatagttagggatatt
acttacctaatttcaaattttattcccaatgaagaaagtatgctaaaattaattgattgt
attattgaaaaaatagatgaaaaaagaattatttccaatttttcaacatacaatggaaaa
agtgacctagatatcattgtcaagaacttttcaaagttattatacatagaatattctcaa
acacaaggtgaatggctagatacagtctctagtttcaagggtgaaaactcaattccaatt
atgactatccataagagtaaaggattagaatatgaggtagtctattttctaggcttggag
gattctgcattctggagttttaatgatcaaccggaagaagataaaagtgcgttctttgtc
gcactttcaagagcaaaaagtcacttaatattcacatactgtaaattgagaaataatagt
ccgcaaaataatagaaatattaatgagatatattcattgttgactcaatccaatttagtt
gatgttattaattaa
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