Streptococcus ilei I-G2: N596_05925
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Entry
N596_05925 CDS
T02879
Name
(GenBank) polynucleotide phosphorylase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
sig
Streptococcus ilei I-G2
Pathway
sig03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sig00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
N596_05925
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sig03019
]
N596_05925
03016 Transfer RNA biogenesis [BR:
sig03016
]
N596_05925
Enzymes [BR:
sig01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
N596_05925
Messenger RNA biogenesis [BR:
sig03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
N596_05925
Transfer RNA biogenesis [BR:
sig03016
]
Prokaryotic type
tRNA degradation factors
N596_05925
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
KH_2
S1_2
KH-I_KHDC4-BBP
SPATA25
DUF4404
Motif
Other DBs
NCBI-GeneID:
17316419
NCBI-ProteinID:
AGY40330
LinkDB
All DBs
Position
complement(1201246..1203462)
Genome browser
AA seq
738 aa
AA seq
DB search
MVKQVFKTTFAGRELIVETGQVAKQANGSVVVRYGESTVLTAAVMSKKMATGDFFPLQVN
YEEKMYAAGKFPGGFMKREGRPSTDATLTARLIDRPIRPMFAEGFRNEVQVINTVLSYDE
NASAPMAAMFGSSLALSISDIPFDGPIAGVQVGYVDGEIIINPTQEQAERSLLELTVAGT
KHAINMVESGAKELSEEIMLEALLKGHEAVKELIAFQEEIVAAVGKEKAEVELLHVDEEL
QAEIIAAYNSDLQKAVQVEEKLAREAATQAVKDQVTAVYEEKYADHEEFDRIMRDVAEIL
EQMEHAEVRRLITEDKVRPDGRKVDEIRPLEAVVDFVPRVHGSGLFTRGQTQALSTLTLA
PMGETQIIDGLDPEYKKRFMHHYNFPQYSVGETGRYGAPGRREIGHGALGERALEQVLPS
LEEFPYAIRLVAEVLESNGSSSQASICAGTLALMAGGVPIKAPVAGIAMGLISDGSNYTV
LTDIQGLEDHFGDMDFKVAGTRDGITALQMDIKIQGITAEILTEALAQAKKARFEILDVI
EETIPEVRPELAPTAPKIDTIKIDVDKIKIVIGKGGETIDKIIAETGVKIDIDEEGNVSI
YSSDQAAINRAKEIIAGLVREAKVDEVYHAKVVRIEKFGAFVNLFDKTDALVHISEMAWT
RTNRVEDLVEIGDEVDVKVIKIDEKGRVDASMKALLPRPPKPEHAEEKGDKAHRHGDRPR
HHKPKKDFAKDASQETKE
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
atggtaaaacaagtgtttaaaacgacttttgcgggtcgtgagttgatcgtagagactggc
caggttgccaagcaagcaaatggttctgttgtcgtacgttacggtgagtcaactgtcttg
acggcagctgtcatgtctaagaagatggcaactggggatttcttcccactccaagtcaat
tacgaagaaaaaatgtatgcagctgggaagttccctggtggctttatgaagcgggaagga
cgtccttcaacagatgcgactttgacagcgcgtttgattgaccgtccgatccgtccgatg
tttgcggaaggtttccgtaacgaagtgcaagtcatcaatactgtcctttcttacgatgaa
aatgcctctgcaccaatggcagccatgtttggttcatccttggccttgtctatctcagat
attccatttgacggcccaatcgctggagtacaagtaggttatgtcgatggggaaatcatc
atcaacccaacccaagaacaagcagagcgctcgcttcttgaattgacagtagctggtacc
aagcacgctatcaacatggtagagtctggtgccaaagaattgtcagaagaaatcatgttg
gaagctcttttgaaagggcatgaagccgttaaagaattgattgccttccaagaagaaatc
gttgcggcagtcggcaaagaaaaagcagaagttgaattgcttcatgtagatgaggaattg
caagctgaaatcatcgcagcctacaacagtgaccttcaaaaagcggtccaagtagaagaa
aaattggctcgtgaagctgcaactcaagcagtcaaagaccaagtcacagccgtttacgaa
gaaaaatatgcagaccacgaagaatttgaccgtatcatgcgggatgtggctgaaatcttg
gaacaaatggaacacgcagaagtgcgccgtttgattacagaagacaaggttcgtcctgac
ggtcgtaaggtcgatgaaatccgtcctttggaagcggttgttgacttcgttccccgtgtg
cacggttcaggtctctttactcgtggacaaacgcaggccctttctaccttgacgttggcg
ccaatgggtgaaacgcaaatcatcgatggtttggatccagagtacaagaaacgctttatg
caccactataacttcccacaatactctgttggtgaaacgggtcgttacggtgcgcctggt
cgtcgtgagattggtcacggtgctcttggtgagcgtgctcttgagcaagtcttgccaagc
ttggaagaattcccatacgcgatccgtctggtagcagaagtcttggaatcaaacggttct
tcttctcaagcctctatctgtgcgggaacgcttgcccttatggctggtggtgtgccaatc
aaggcgccagtagcagggattgccatgggactgatttctgatggaagtaactataccgta
ttgacagatatccaaggtttggaagaccactttggagatatggactttaaggttgcaggt
acgcgtgacgggattacagcccttcaaatggatatcaagatccaagggattactgcagaa
atcttgacggaggctcttgctcaagccaagaaagctcgttttgaaattcttgatgtgatt
gaagaaacgattccagaagttcgtccagaattggctccaactgctccgaaaattgatacc
atcaagattgatgtggacaagatcaagattgtcatcggtaaaggtggagaaaccatcgac
aagatcatcgctgaaacaggcgttaagattgatatcgacgaagaaggtaacgtgtctatc
tactcgagtgatcaagctgcgattaaccgtgccaaagaaatcattgctggcttggttcgt
gaagcgaaagtggatgaagtttaccatgccaaagtggttcggattgagaaatttggtgcc
tttgtaaacctctttgataagacagatgccctcgttcatatctctgaaatggcttggaca
cgtaccaaccgtgtcgaagacttggtagaaatcggtgatgaagtggatgtcaaggtaatt
aagatcgatgaaaaaggccgtgtcgatgcttcgatgaaggctcttcttcctcgtccacca
aaaccagaacatgcagaagaaaaaggggataaggctcatcgtcatggtgatcgtcctcgt
caccacaaaccaaaaaaagactttgctaaagatgcaagccaagaaacgaaagaataa
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